Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43aQ3TL54 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43aQ3TL54 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43aQ3TL54 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43aQ3TL54 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.55■□□□□ 0.72
Trim43aQ3TL54 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43aQ3TL54 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43aQ3TL54 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43aQ3TL54 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim43aQ3TL54 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43aQ3TL54 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
Trim43aQ3TL54 Gm12251-201ENSMUST00000117893 792 ntBASIC19.54■□□□□ 0.72
Trim43aQ3TL54 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43aQ3TL54 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43aQ3TL54 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim43aQ3TL54 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.54■□□□□ 0.72
Trim43aQ3TL54 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43aQ3TL54 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43aQ3TL54 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim43aQ3TL54 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trim43aQ3TL54 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43aQ3TL54 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43aQ3TL54 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43aQ3TL54 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43aQ3TL54 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43aQ3TL54 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43aQ3TL54 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43aQ3TL54 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43aQ3TL54 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43aQ3TL54 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43aQ3TL54 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43aQ3TL54 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43aQ3TL54 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.53■□□□□ 0.72
Trim43aQ3TL54 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43aQ3TL54 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.53■□□□□ 0.72
Trim43aQ3TL54 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43aQ3TL54 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43aQ3TL54 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.53■□□□□ 0.72
Trim43aQ3TL54 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43aQ3TL54 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43aQ3TL54 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43aQ3TL54 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43aQ3TL54 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43aQ3TL54 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43aQ3TL54 Gm8493-201ENSMUST00000196881 489 ntBASIC19.52■□□□□ 0.72
Trim43aQ3TL54 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.52■□□□□ 0.72
Trim43aQ3TL54 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43aQ3TL54 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43aQ3TL54 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43aQ3TL54 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43aQ3TL54 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trim43aQ3TL54 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim43aQ3TL54 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim43aQ3TL54 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trim43aQ3TL54 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trim43aQ3TL54 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43aQ3TL54 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43aQ3TL54 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.5■□□□□ 0.71
Trim43aQ3TL54 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43aQ3TL54 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.5■□□□□ 0.71
Trim43aQ3TL54 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43aQ3TL54 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43aQ3TL54 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43aQ3TL54 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43aQ3TL54 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43aQ3TL54 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43aQ3TL54 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43aQ3TL54 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43aQ3TL54 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43aQ3TL54 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43aQ3TL54 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43aQ3TL54 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim43aQ3TL54 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43aQ3TL54 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43aQ3TL54 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trim43aQ3TL54 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43aQ3TL54 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim43aQ3TL54 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Trim43aQ3TL54 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43aQ3TL54 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43aQ3TL54 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.49■□□□□ 0.71
Trim43aQ3TL54 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trim43aQ3TL54 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms