Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col10a1Q05306 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col10a1Q05306 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col10a1Q05306 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col10a1Q05306 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.01■□□□□ 0.31
Col10a1Q05306 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col10a1Q05306 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col10a1Q05306 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col10a1Q05306 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col10a1Q05306 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col10a1Q05306 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17■□□□□ 0.31
Col10a1Q05306 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col10a1Q05306 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17■□□□□ 0.31
Col10a1Q05306 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17■□□□□ 0.31
Col10a1Q05306 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col10a1Q05306 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col10a1Q05306 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Col10a1Q05306 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col10a1Q05306 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Col10a1Q05306 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Col10a1Q05306 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col10a1Q05306 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col10a1Q05306 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17■□□□□ 0.31
Col10a1Q05306 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col10a1Q05306 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col10a1Q05306 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.99■□□□□ 0.31
Col10a1Q05306 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col10a1Q05306 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col10a1Q05306 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col10a1Q05306 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col10a1Q05306 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col10a1Q05306 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col10a1Q05306 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.99■□□□□ 0.31
Col10a1Q05306 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Col10a1Q05306 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col10a1Q05306 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col10a1Q05306 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col10a1Q05306 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col10a1Q05306 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col10a1Q05306 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col10a1Q05306 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Col10a1Q05306 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col10a1Q05306 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col10a1Q05306 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col10a1Q05306 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col10a1Q05306 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col10a1Q05306 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.98■□□□□ 0.31
Col10a1Q05306 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Col10a1Q05306 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col10a1Q05306 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col10a1Q05306 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col10a1Q05306 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col10a1Q05306 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col10a1Q05306 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Col10a1Q05306 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col10a1Q05306 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col10a1Q05306 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col10a1Q05306 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col10a1Q05306 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col10a1Q05306 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col10a1Q05306 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col10a1Q05306 Gm7290-201ENSMUST00000104990 617 ntBASIC16.97■□□□□ 0.31
Col10a1Q05306 Gm12918-201ENSMUST00000120234 636 ntBASIC16.97■□□□□ 0.31
Col10a1Q05306 Gm15710-201ENSMUST00000121821 636 ntBASIC16.97■□□□□ 0.31
Col10a1Q05306 Mir5133-201ENSMUST00000174955 77 ntBASIC16.97■□□□□ 0.31
Col10a1Q05306 Gm5075-201ENSMUST00000196916 622 ntBASIC16.97■□□□□ 0.31
Col10a1Q05306 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.97■□□□□ 0.31
Col10a1Q05306 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.97■□□□□ 0.31
Col10a1Q05306 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.97■□□□□ 0.31
Col10a1Q05306 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col10a1Q05306 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col10a1Q05306 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col10a1Q05306 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.97■□□□□ 0.31
Col10a1Q05306 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col10a1Q05306 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col10a1Q05306 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col10a1Q05306 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col10a1Q05306 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Col10a1Q05306 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Col10a1Q05306 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col10a1Q05306 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Col10a1Q05306 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Col10a1Q05306 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col10a1Q05306 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col10a1Q05306 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col10a1Q05306 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Col10a1Q05306 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Col10a1Q05306 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.96■□□□□ 0.31
Col10a1Q05306 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col10a1Q05306 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.96■□□□□ 0.31
Col10a1Q05306 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col10a1Q05306 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col10a1Q05306 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col10a1Q05306 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col10a1Q05306 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Col10a1Q05306 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Col10a1Q05306 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col10a1Q05306 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col10a1Q05306 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col10a1Q05306 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 109.7 ms