Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Cacna1aP97445 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1aP97445 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.04■□□□□ 0.32
Cacna1aP97445 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.04■□□□□ 0.32
Cacna1aP97445 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1aP97445 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1aP97445 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1aP97445 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1aP97445 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1aP97445 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1aP97445 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.03■□□□□ 0.32
Cacna1aP97445 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1aP97445 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1aP97445 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1aP97445 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1aP97445 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.02■□□□□ 0.32
Cacna1aP97445 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1aP97445 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1aP97445 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1aP97445 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1aP97445 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cacna1aP97445 Gm7889-201ENSMUST00000185591 958 ntBASIC17.01■□□□□ 0.31
Cacna1aP97445 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.01■□□□□ 0.31
Cacna1aP97445 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
Cacna1aP97445 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1aP97445 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1aP97445 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.01■□□□□ 0.31
Cacna1aP97445 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1aP97445 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1aP97445 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1aP97445 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1aP97445 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1aP97445 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1aP97445 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1aP97445 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cacna1aP97445 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1aP97445 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1aP97445 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cacna1aP97445 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1aP97445 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1aP97445 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1aP97445 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1aP97445 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1aP97445 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Cacna1aP97445 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1aP97445 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17■□□□□ 0.31
Cacna1aP97445 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17■□□□□ 0.31
Cacna1aP97445 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17■□□□□ 0.31
Cacna1aP97445 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1aP97445 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1aP97445 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1aP97445 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cacna1aP97445 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17■□□□□ 0.31
Cacna1aP97445 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1aP97445 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1aP97445 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1aP97445 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Cacna1aP97445 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1aP97445 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1aP97445 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1aP97445 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1aP97445 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Cacna1aP97445 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1aP97445 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1aP97445 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1aP97445 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1aP97445 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1aP97445 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1aP97445 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1aP97445 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Cacna1aP97445 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1aP97445 Gm17971-201ENSMUST00000190239 806 ntBASIC16.99■□□□□ 0.31
Cacna1aP97445 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.99■□□□□ 0.31
Cacna1aP97445 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1aP97445 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1aP97445 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.99■□□□□ 0.31
Cacna1aP97445 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cacna1aP97445 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1aP97445 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1aP97445 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.98■□□□□ 0.31
Cacna1aP97445 Odf3b-204ENSMUST00000227834 930 ntBASIC16.98■□□□□ 0.31
Cacna1aP97445 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1aP97445 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.98■□□□□ 0.31
Cacna1aP97445 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1aP97445 Gm11927-201ENSMUST00000118472 759 ntBASIC16.97■□□□□ 0.31
Cacna1aP97445 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.97■□□□□ 0.31
Cacna1aP97445 Gm11539-201ENSMUST00000119837 557 ntBASIC16.97■□□□□ 0.31
Cacna1aP97445 Gm13436-201ENSMUST00000120418 567 ntBASIC16.97■□□□□ 0.31
Cacna1aP97445 Gm13559-201ENSMUST00000120476 863 ntBASIC16.97■□□□□ 0.31
Cacna1aP97445 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1aP97445 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1aP97445 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Cacna1aP97445 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Cacna1aP97445 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1aP97445 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1aP97445 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Cacna1aP97445 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.97■□□□□ 0.31
Cacna1aP97445 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1aP97445 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1aP97445 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms