Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm11236J3QMS7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm11236J3QMS7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.4■□□□□ 0.7
Gm11236J3QMS7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm11236J3QMS7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm11236J3QMS7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm11236J3QMS7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm11236J3QMS7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Gm11236J3QMS7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm11236J3QMS7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.39■□□□□ 0.69
Gm11236J3QMS7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm11236J3QMS7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm11236J3QMS7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm11236J3QMS7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm11236J3QMS7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Gm11236J3QMS7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.38■□□□□ 0.69
Gm11236J3QMS7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.38■□□□□ 0.69
Gm11236J3QMS7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm11236J3QMS7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Gm11236J3QMS7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Gm11236J3QMS7 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.38■□□□□ 0.69
Gm11236J3QMS7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.38■□□□□ 0.69
Gm11236J3QMS7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm11236J3QMS7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm11236J3QMS7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm11236J3QMS7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm11236J3QMS7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm11236J3QMS7 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.37■□□□□ 0.69
Gm11236J3QMS7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm11236J3QMS7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.37■□□□□ 0.69
Gm11236J3QMS7 Mir5122-201ENSMUST00000175004 89 ntBASIC19.37■□□□□ 0.69
Gm11236J3QMS7 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.37■□□□□ 0.69
Gm11236J3QMS7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Gm11236J3QMS7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm11236J3QMS7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm11236J3QMS7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm11236J3QMS7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm11236J3QMS7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm11236J3QMS7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Gm11236J3QMS7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm11236J3QMS7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm11236J3QMS7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Gm15565-201ENSMUST00000118890 427 ntBASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Gm15375-201ENSMUST00000119510 849 ntBASIC19.36■□□□□ 0.69
Gm11236J3QMS7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11236J3QMS7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm11236J3QMS7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm11236J3QMS7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm11236J3QMS7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm11236J3QMS7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Gm11236J3QMS7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm11236J3QMS7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm11236J3QMS7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm11236J3QMS7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm11236J3QMS7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.34■□□□□ 0.69
Gm11236J3QMS7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm11236J3QMS7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm11236J3QMS7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm11236J3QMS7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Gm11236J3QMS7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Gm11236J3QMS7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm11236J3QMS7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm11236J3QMS7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Gm11236J3QMS7 Gm43183-201ENSMUST00000200632 547 ntBASIC19.34■□□□□ 0.69
Gm11236J3QMS7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm11236J3QMS7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm11236J3QMS7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm11236J3QMS7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm11236J3QMS7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm11236J3QMS7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm11236J3QMS7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm11236J3QMS7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm11236J3QMS7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Gm11236J3QMS7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm11236J3QMS7 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.33■□□□□ 0.68
Gm11236J3QMS7 Gm18025-201ENSMUST00000221733 862 ntBASIC19.33■□□□□ 0.68
Gm11236J3QMS7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms