Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx41Q91VN6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx41Q91VN6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.19■□□□□ 0.98
Ddx41Q91VN6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ddx41Q91VN6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.19■□□□□ 0.98
Ddx41Q91VN6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx41Q91VN6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx41Q91VN6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx41Q91VN6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ddx41Q91VN6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx41Q91VN6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx41Q91VN6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx41Q91VN6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx41Q91VN6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx41Q91VN6 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.17■□□□□ 0.98
Ddx41Q91VN6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.17■□□□□ 0.98
Ddx41Q91VN6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Ddx41Q91VN6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx41Q91VN6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.17■□□□□ 0.98
Ddx41Q91VN6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx41Q91VN6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx41Q91VN6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx41Q91VN6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx41Q91VN6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx41Q91VN6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx41Q91VN6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx41Q91VN6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx41Q91VN6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx41Q91VN6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.16■□□□□ 0.98
Ddx41Q91VN6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx41Q91VN6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx41Q91VN6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ddx41Q91VN6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.16■□□□□ 0.98
Ddx41Q91VN6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ddx41Q91VN6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx41Q91VN6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx41Q91VN6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Ddx41Q91VN6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx41Q91VN6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx41Q91VN6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx41Q91VN6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx41Q91VN6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.15■□□□□ 0.98
Ddx41Q91VN6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Ddx41Q91VN6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx41Q91VN6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Ddx41Q91VN6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Ddx41Q91VN6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx41Q91VN6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx41Q91VN6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx41Q91VN6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Ddx41Q91VN6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx41Q91VN6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Ddx41Q91VN6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ddx41Q91VN6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx41Q91VN6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx41Q91VN6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx41Q91VN6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ddx41Q91VN6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx41Q91VN6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx41Q91VN6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Ddx41Q91VN6 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.14■□□□□ 0.97
Ddx41Q91VN6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx41Q91VN6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx41Q91VN6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx41Q91VN6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx41Q91VN6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx41Q91VN6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx41Q91VN6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.13■□□□□ 0.97
Ddx41Q91VN6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx41Q91VN6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ddx41Q91VN6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.13■□□□□ 0.97
Ddx41Q91VN6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Ddx41Q91VN6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx41Q91VN6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx41Q91VN6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ddx41Q91VN6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx41Q91VN6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ddx41Q91VN6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ddx41Q91VN6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx41Q91VN6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx41Q91VN6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx41Q91VN6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms