Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.36■□□□□ 0.85
Rpap2Q8VC34 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rpap2Q8VC34 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Rpap2Q8VC34 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.36■□□□□ 0.85
Rpap2Q8VC34 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.36■□□□□ 0.85
Rpap2Q8VC34 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpap2Q8VC34 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Rpap2Q8VC34 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpap2Q8VC34 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.35■□□□□ 0.85
Rpap2Q8VC34 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rpap2Q8VC34 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rpap2Q8VC34 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.35■□□□□ 0.85
Rpap2Q8VC34 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rpap2Q8VC34 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rpap2Q8VC34 Gm6365-201ENSMUST00000054711 744 ntBASIC20.35■□□□□ 0.85
Rpap2Q8VC34 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpap2Q8VC34 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpap2Q8VC34 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpap2Q8VC34 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpap2Q8VC34 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpap2Q8VC34 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap2Q8VC34 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap2Q8VC34 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap2Q8VC34 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap2Q8VC34 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap2Q8VC34 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap2Q8VC34 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap2Q8VC34 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap2Q8VC34 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpap2Q8VC34 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rpap2Q8VC34 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rpap2Q8VC34 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rpap2Q8VC34 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rpap2Q8VC34 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rpap2Q8VC34 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.33■□□□□ 0.85
Rpap2Q8VC34 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.33■□□□□ 0.85
Rpap2Q8VC34 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rpap2Q8VC34 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.33■□□□□ 0.84
Rpap2Q8VC34 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Rpap2Q8VC34 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rpap2Q8VC34 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rpap2Q8VC34 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.32■□□□□ 0.84
Rpap2Q8VC34 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Rpap2Q8VC34 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.32■□□□□ 0.84
Rpap2Q8VC34 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.32■□□□□ 0.84
Rpap2Q8VC34 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.32■□□□□ 0.84
Rpap2Q8VC34 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.32■□□□□ 0.84
Rpap2Q8VC34 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpap2Q8VC34 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpap2Q8VC34 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap2Q8VC34 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap2Q8VC34 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap2Q8VC34 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap2Q8VC34 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap2Q8VC34 Gm7290-201ENSMUST00000104990 617 ntBASIC20.31■□□□□ 0.84
Rpap2Q8VC34 Gm12918-201ENSMUST00000120234 636 ntBASIC20.31■□□□□ 0.84
Rpap2Q8VC34 Gm15710-201ENSMUST00000121821 636 ntBASIC20.31■□□□□ 0.84
Rpap2Q8VC34 Gm5075-201ENSMUST00000196916 622 ntBASIC20.31■□□□□ 0.84
Rpap2Q8VC34 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap2Q8VC34 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.31■□□□□ 0.84
Rpap2Q8VC34 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.31■□□□□ 0.84
Rpap2Q8VC34 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap2Q8VC34 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap2Q8VC34 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap2Q8VC34 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap2Q8VC34 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap2Q8VC34 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpap2Q8VC34 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rpap2Q8VC34 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpap2Q8VC34 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rpap2Q8VC34 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpap2Q8VC34 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpap2Q8VC34 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpap2Q8VC34 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpap2Q8VC34 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpap2Q8VC34 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap2Q8VC34 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap2Q8VC34 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap2Q8VC34 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap2Q8VC34 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap2Q8VC34 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap2Q8VC34 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap2Q8VC34 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap2Q8VC34 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms