Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Col10a1Q05306 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col10a1Q05306 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col10a1Q05306 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Col10a1Q05306 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.06■□□□□ 0.32
Col10a1Q05306 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col10a1Q05306 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col10a1Q05306 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.06■□□□□ 0.32
Col10a1Q05306 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.06■□□□□ 0.32
Col10a1Q05306 Gm6365-201ENSMUST00000054711 744 ntBASIC17.06■□□□□ 0.32
Col10a1Q05306 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col10a1Q05306 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col10a1Q05306 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col10a1Q05306 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col10a1Q05306 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col10a1Q05306 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col10a1Q05306 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col10a1Q05306 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col10a1Q05306 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col10a1Q05306 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col10a1Q05306 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col10a1Q05306 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col10a1Q05306 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col10a1Q05306 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Col10a1Q05306 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col10a1Q05306 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
Col10a1Q05306 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col10a1Q05306 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col10a1Q05306 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.05■□□□□ 0.32
Col10a1Q05306 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.05■□□□□ 0.32
Col10a1Q05306 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col10a1Q05306 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Col10a1Q05306 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col10a1Q05306 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.05■□□□□ 0.32
Col10a1Q05306 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col10a1Q05306 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col10a1Q05306 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Col10a1Q05306 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col10a1Q05306 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Col10a1Q05306 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col10a1Q05306 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col10a1Q05306 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.04■□□□□ 0.32
Col10a1Q05306 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col10a1Q05306 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col10a1Q05306 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Col10a1Q05306 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col10a1Q05306 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Col10a1Q05306 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col10a1Q05306 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.04■□□□□ 0.32
Col10a1Q05306 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col10a1Q05306 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Col10a1Q05306 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col10a1Q05306 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col10a1Q05306 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Col10a1Q05306 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Col10a1Q05306 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col10a1Q05306 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col10a1Q05306 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col10a1Q05306 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col10a1Q05306 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col10a1Q05306 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Col10a1Q05306 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.03■□□□□ 0.32
Col10a1Q05306 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col10a1Q05306 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col10a1Q05306 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.03■□□□□ 0.32
Col10a1Q05306 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col10a1Q05306 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col10a1Q05306 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col10a1Q05306 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col10a1Q05306 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.03■□□□□ 0.32
Col10a1Q05306 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col10a1Q05306 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col10a1Q05306 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.02■□□□□ 0.32
Col10a1Q05306 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col10a1Q05306 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col10a1Q05306 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.02■□□□□ 0.32
Col10a1Q05306 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.02■□□□□ 0.32
Col10a1Q05306 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Col10a1Q05306 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col10a1Q05306 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col10a1Q05306 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.02■□□□□ 0.32
Col10a1Q05306 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col10a1Q05306 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Col10a1Q05306 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col10a1Q05306 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Col10a1Q05306 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.02■□□□□ 0.32
Col10a1Q05306 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Col10a1Q05306 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col10a1Q05306 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.02■□□□□ 0.31
Col10a1Q05306 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col10a1Q05306 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Col10a1Q05306 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col10a1Q05306 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col10a1Q05306 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col10a1Q05306 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col10a1Q05306 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col10a1Q05306 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col10a1Q05306 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col10a1Q05306 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col10a1Q05306 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms