Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Tpm3P21107 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Tpm3P21107 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.78■□□□□ 0.92
Tpm3P21107 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm3P21107 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Tpm3P21107 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm3P21107 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm3P21107 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm3P21107 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Tpm3P21107 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm3P21107 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm3P21107 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Tpm3P21107 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm3P21107 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm3P21107 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm3P21107 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm3P21107 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.77■□□□□ 0.92
Tpm3P21107 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm3P21107 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm3P21107 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Tpm3P21107 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm3P21107 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm3P21107 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm3P21107 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.77■□□□□ 0.92
Tpm3P21107 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm3P21107 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Tpm3P21107 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm3P21107 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.77■□□□□ 0.92
Tpm3P21107 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.77■□□□□ 0.91
Tpm3P21107 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tpm3P21107 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tpm3P21107 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.77■□□□□ 0.91
Tpm3P21107 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm3P21107 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm3P21107 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm3P21107 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm3P21107 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.76■□□□□ 0.91
Tpm3P21107 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.76■□□□□ 0.91
Tpm3P21107 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.76■□□□□ 0.91
Tpm3P21107 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm3P21107 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm3P21107 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm3P21107 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm3P21107 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm3P21107 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Tpm3P21107 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
Tpm3P21107 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Tpm3P21107 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm3P21107 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm3P21107 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm3P21107 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm3P21107 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm3P21107 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm3P21107 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.75■□□□□ 0.91
Tpm3P21107 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm3P21107 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm3P21107 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.75■□□□□ 0.91
Tpm3P21107 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
Tpm3P21107 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.75■□□□□ 0.91
Tpm3P21107 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.74■□□□□ 0.91
Tpm3P21107 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.74■□□□□ 0.91
Tpm3P21107 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm3P21107 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Tpm3P21107 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.74■□□□□ 0.91
Tpm3P21107 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm3P21107 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.74■□□□□ 0.91
Tpm3P21107 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.74■□□□□ 0.91
Tpm3P21107 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.74■□□□□ 0.91
Tpm3P21107 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm3P21107 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm3P21107 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.73■□□□□ 0.91
Tpm3P21107 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm3P21107 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm3P21107 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm3P21107 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Tpm3P21107 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.73■□□□□ 0.91
Tpm3P21107 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tpm3P21107 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm3P21107 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm3P21107 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm3P21107 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm3P21107 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm3P21107 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.72■□□□□ 0.91
Tpm3P21107 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm3P21107 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm3P21107 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.72■□□□□ 0.91
Tpm3P21107 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm3P21107 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
Tpm3P21107 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm3P21107 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm3P21107 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.71■□□□□ 0.91
Tpm3P21107 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm3P21107 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Tpm3P21107 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Tpm3P21107 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.71■□□□□ 0.91
Tpm3P21107 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.71■□□□□ 0.91
Tpm3P21107 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm3P21107 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm3P21107 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tpm3P21107 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms