Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BckdkO55028 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BckdkO55028 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BckdkO55028 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
BckdkO55028 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BckdkO55028 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BckdkO55028 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BckdkO55028 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
BckdkO55028 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.13■□□□□ 0.33
BckdkO55028 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BckdkO55028 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BckdkO55028 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BckdkO55028 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BckdkO55028 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BckdkO55028 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BckdkO55028 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BckdkO55028 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BckdkO55028 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BckdkO55028 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.12■□□□□ 0.33
BckdkO55028 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BckdkO55028 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BckdkO55028 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
BckdkO55028 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BckdkO55028 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.12■□□□□ 0.33
BckdkO55028 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BckdkO55028 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BckdkO55028 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BckdkO55028 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BckdkO55028 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
BckdkO55028 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BckdkO55028 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BckdkO55028 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BckdkO55028 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BckdkO55028 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BckdkO55028 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.11■□□□□ 0.33
BckdkO55028 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BckdkO55028 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BckdkO55028 Mir5133-201ENSMUST00000174955 77 ntBASIC17.11■□□□□ 0.33
BckdkO55028 Gm38205-201ENSMUST00000192243 258 ntBASIC17.11■□□□□ 0.33
BckdkO55028 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BckdkO55028 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
BckdkO55028 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BckdkO55028 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BckdkO55028 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BckdkO55028 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BckdkO55028 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BckdkO55028 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BckdkO55028 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BckdkO55028 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BckdkO55028 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BckdkO55028 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BckdkO55028 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BckdkO55028 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.1■□□□□ 0.33
BckdkO55028 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.1■□□□□ 0.33
BckdkO55028 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.1■□□□□ 0.33
BckdkO55028 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
BckdkO55028 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.1■□□□□ 0.33
BckdkO55028 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
BckdkO55028 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
BckdkO55028 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.1■□□□□ 0.33
BckdkO55028 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
BckdkO55028 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BckdkO55028 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BckdkO55028 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.09■□□□□ 0.33
BckdkO55028 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BckdkO55028 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BckdkO55028 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.09■□□□□ 0.33
BckdkO55028 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.09■□□□□ 0.33
BckdkO55028 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.09■□□□□ 0.33
BckdkO55028 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BckdkO55028 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BckdkO55028 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BckdkO55028 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BckdkO55028 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BckdkO55028 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
BckdkO55028 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BckdkO55028 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BckdkO55028 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.08■□□□□ 0.33
BckdkO55028 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
BckdkO55028 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
BckdkO55028 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.08■□□□□ 0.32
BckdkO55028 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.08■□□□□ 0.32
BckdkO55028 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
BckdkO55028 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms