Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hps1O08983 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hps1O08983 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hps1O08983 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hps1O08983 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.12■□□□□ 0.33
Hps1O08983 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hps1O08983 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.12■□□□□ 0.33
Hps1O08983 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Hps1O08983 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Hps1O08983 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Hps1O08983 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hps1O08983 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hps1O08983 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hps1O08983 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hps1O08983 Gm26571-201ENSMUST00000181399 666 ntBASIC17.12■□□□□ 0.33
Hps1O08983 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hps1O08983 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hps1O08983 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hps1O08983 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hps1O08983 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hps1O08983 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hps1O08983 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.12■□□□□ 0.33
Hps1O08983 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hps1O08983 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hps1O08983 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hps1O08983 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hps1O08983 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hps1O08983 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hps1O08983 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Hps1O08983 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hps1O08983 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hps1O08983 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hps1O08983 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Hps1O08983 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hps1O08983 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hps1O08983 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hps1O08983 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.11■□□□□ 0.33
Hps1O08983 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hps1O08983 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hps1O08983 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hps1O08983 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hps1O08983 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hps1O08983 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hps1O08983 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hps1O08983 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hps1O08983 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hps1O08983 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hps1O08983 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hps1O08983 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hps1O08983 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hps1O08983 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hps1O08983 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hps1O08983 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hps1O08983 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hps1O08983 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hps1O08983 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.1■□□□□ 0.33
Hps1O08983 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.1■□□□□ 0.33
Hps1O08983 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hps1O08983 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Hps1O08983 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hps1O08983 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hps1O08983 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hps1O08983 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Hps1O08983 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hps1O08983 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hps1O08983 Gm12251-201ENSMUST00000117893 792 ntBASIC17.09■□□□□ 0.33
Hps1O08983 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.09■□□□□ 0.33
Hps1O08983 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.09■□□□□ 0.33
Hps1O08983 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.09■□□□□ 0.33
Hps1O08983 Gm18671-201ENSMUST00000214826 683 ntBASIC17.09■□□□□ 0.33
Hps1O08983 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hps1O08983 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hps1O08983 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Hps1O08983 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hps1O08983 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hps1O08983 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hps1O08983 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hps1O08983 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Hps1O08983 Grk6-206ENSMUST00000224995 2971 ntBASIC17.08■□□□□ 0.33
Hps1O08983 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hps1O08983 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.08■□□□□ 0.33
Hps1O08983 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hps1O08983 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hps1O08983 Gm37179-201ENSMUST00000194862 823 ntBASIC17.08■□□□□ 0.32
Hps1O08983 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hps1O08983 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hps1O08983 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hps1O08983 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Hps1O08983 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hps1O08983 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hps1O08983 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hps1O08983 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hps1O08983 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hps1O08983 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hps1O08983 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Hps1O08983 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Hps1O08983 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hps1O08983 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hps1O08983 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Hps1O08983 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms