Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Gm27321-201ENSMUST00000185021 205 ntBASIC10.56□□□□□ -0.72
Herc1E9PZP8 Gm17808-201ENSMUST00000200859 894 ntBASIC10.56□□□□□ -0.72
Herc1E9PZP8 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Herc1E9PZP8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Herc1E9PZP8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Herc1E9PZP8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Herc1E9PZP8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Herc1E9PZP8 Gm15375-201ENSMUST00000119510 849 ntBASIC10.55□□□□□ -0.72
Herc1E9PZP8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Herc1E9PZP8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Herc1E9PZP8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Herc1E9PZP8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Herc1E9PZP8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Herc1E9PZP8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Herc1E9PZP8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Herc1E9PZP8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC10.55□□□□□ -0.72
Herc1E9PZP8 Gm43909-201ENSMUST00000203443 1876 ntBASIC10.55□□□□□ -0.72
Herc1E9PZP8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Herc1E9PZP8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Herc1E9PZP8 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Herc1E9PZP8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Herc1E9PZP8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Herc1E9PZP8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc1E9PZP8 Gm11950-201ENSMUST00000121615 838 ntBASIC10.54□□□□□ -0.72
Herc1E9PZP8 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Herc1E9PZP8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc1E9PZP8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc1E9PZP8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC10.54□□□□□ -0.72
Herc1E9PZP8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc1E9PZP8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc1E9PZP8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Herc1E9PZP8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC10.54□□□□□ -0.72
Herc1E9PZP8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC10.54□□□□□ -0.72
Herc1E9PZP8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC10.54□□□□□ -0.72
Herc1E9PZP8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC10.54□□□□□ -0.72
Herc1E9PZP8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Herc1E9PZP8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Herc1E9PZP8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Herc1E9PZP8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Herc1E9PZP8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc1E9PZP8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc1E9PZP8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Herc1E9PZP8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Herc1E9PZP8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Herc1E9PZP8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Herc1E9PZP8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Herc1E9PZP8 Gm42670-201ENSMUST00000201816 1292 ntBASIC10.53□□□□□ -0.72
Herc1E9PZP8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Herc1E9PZP8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC10.53□□□□□ -0.72
Herc1E9PZP8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Herc1E9PZP8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Herc1E9PZP8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Herc1E9PZP8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC10.53□□□□□ -0.72
Herc1E9PZP8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Herc1E9PZP8 Gm5745-201ENSMUST00000183748 313 ntBASIC10.53□□□□□ -0.72
Herc1E9PZP8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.53□□□□□ -0.72
Herc1E9PZP8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Herc1E9PZP8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Herc1E9PZP8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Herc1E9PZP8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Herc1E9PZP8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Herc1E9PZP8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC10.53□□□□□ -0.72
Herc1E9PZP8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Herc1E9PZP8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Herc1E9PZP8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC10.52□□□□□ -0.72
Herc1E9PZP8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.52□□□□□ -0.72
Herc1E9PZP8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Herc1E9PZP8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Herc1E9PZP8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Herc1E9PZP8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Herc1E9PZP8 Gm45560-201ENSMUST00000211492 1472 ntBASIC10.52□□□□□ -0.73
Herc1E9PZP8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Herc1E9PZP8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Herc1E9PZP8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Herc1E9PZP8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Herc1E9PZP8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC10.52□□□□□ -0.73
Herc1E9PZP8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Herc1E9PZP8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Herc1E9PZP8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Herc1E9PZP8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Herc1E9PZP8 Flg-201ENSMUST00000050758 1488 ntBASIC10.51□□□□□ -0.73
Herc1E9PZP8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc1E9PZP8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc1E9PZP8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc1E9PZP8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc1E9PZP8 Gm2213-201ENSMUST00000197485 688 ntBASIC10.51□□□□□ -0.73
Herc1E9PZP8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc1E9PZP8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc1E9PZP8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Herc1E9PZP8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc1E9PZP8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc1E9PZP8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Herc1E9PZP8 Gm2756-201ENSMUST00000195851 400 ntBASIC10.51□□□□□ -0.73
Herc1E9PZP8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Herc1E9PZP8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc1E9PZP8 Gm27463-201ENSMUST00000183569 57 ntBASIC10.51□□□□□ -0.73
Herc1E9PZP8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms