Protein–RNA interactions for Protein: E0CX42

Gm4491, Predicted gene 4491, mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4491E0CX42 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC10.08□□□□□ -0.8
Gm4491E0CX42 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC10.08□□□□□ -0.8
Gm4491E0CX42 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Gm4491E0CX42 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Grk6-206ENSMUST00000224995 2971 ntBASIC10.07□□□□□ -0.8
Gm4491E0CX42 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC10.07□□□□□ -0.8
Gm4491E0CX42 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Gm4491E0CX42 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4491E0CX42 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Rarb-207ENSMUST00000225921 2756 ntBASIC10.06□□□□□ -0.8
Gm4491E0CX42 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4491E0CX42 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Gm5953-201ENSMUST00000220644 2616 ntBASIC10.06□□□□□ -0.8
Gm4491E0CX42 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Gm4491E0CX42 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm4491E0CX42 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm4491E0CX42 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm4491E0CX42 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Gm4491E0CX42 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Gm4491E0CX42 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm4491E0CX42 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm4491E0CX42 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm4491E0CX42 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm4491E0CX42 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Gm4491E0CX42 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm4491E0CX42 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms