Protein–RNA interactions for Protein: A0A0A6YWX2

Ighv1-49, Immunoglobulin heavy variable 1-49 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-49A0A0A6YWX2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-49A0A0A6YWX2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-49A0A0A6YWX2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.21□□□□□ -0.29
Ighv1-49A0A0A6YWX2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ighv1-49A0A0A6YWX2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-49A0A0A6YWX2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-49A0A0A6YWX2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-49A0A0A6YWX2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-49A0A0A6YWX2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-49A0A0A6YWX2 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.21□□□□□ -0.29
Ighv1-49A0A0A6YWX2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-49A0A0A6YWX2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.21□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Smad6-203ENSMUST00000179458 273 ntBASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.19□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Gm27454-201ENSMUST00000185090 204 ntBASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-49A0A0A6YWX2 Gm27801-201ENSMUST00000184174 223 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms