Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm10232-201ENSMUST00000089221 720 ntBASIC16.97■□□□□ 0.31
Ebf4Q8K4J2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ebf4Q8K4J2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf4Q8K4J2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf4Q8K4J2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf4Q8K4J2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ebf4Q8K4J2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf4Q8K4J2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf4Q8K4J2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ebf4Q8K4J2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf4Q8K4J2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ebf4Q8K4J2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Ebf4Q8K4J2 Serp2-204ENSMUST00000228055 705 ntBASIC16.96■□□□□ 0.31
Ebf4Q8K4J2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf4Q8K4J2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf4Q8K4J2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf4Q8K4J2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf4Q8K4J2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf4Q8K4J2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf4Q8K4J2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Ebf4Q8K4J2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ebf4Q8K4J2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf4Q8K4J2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Ebf4Q8K4J2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ebf4Q8K4J2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf4Q8K4J2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf4Q8K4J2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf4Q8K4J2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf4Q8K4J2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.94■□□□□ 0.3
Ebf4Q8K4J2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf4Q8K4J2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf4Q8K4J2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf4Q8K4J2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf4Q8K4J2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf4Q8K4J2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ebf4Q8K4J2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf4Q8K4J2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf4Q8K4J2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf4Q8K4J2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.93■□□□□ 0.3
Ebf4Q8K4J2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf4Q8K4J2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf4Q8K4J2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf4Q8K4J2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf4Q8K4J2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf4Q8K4J2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf4Q8K4J2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf4Q8K4J2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ebf4Q8K4J2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.92■□□□□ 0.3
Ebf4Q8K4J2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf4Q8K4J2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf4Q8K4J2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf4Q8K4J2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ebf4Q8K4J2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf4Q8K4J2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf4Q8K4J2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf4Q8K4J2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ebf4Q8K4J2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf4Q8K4J2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf4Q8K4J2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.91■□□□□ 0.3
Ebf4Q8K4J2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf4Q8K4J2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms