Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynbQ8BI41 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.66■□□□□ 0.42
SynbQ8BI41 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynbQ8BI41 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynbQ8BI41 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.66■□□□□ 0.42
SynbQ8BI41 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynbQ8BI41 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynbQ8BI41 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynbQ8BI41 AA386476-201ENSMUST00000098781 1665 ntBASIC17.65■□□□□ 0.42
SynbQ8BI41 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynbQ8BI41 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.65■□□□□ 0.42
SynbQ8BI41 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.65■□□□□ 0.42
SynbQ8BI41 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.65■□□□□ 0.42
SynbQ8BI41 Gm37856-201ENSMUST00000191634 999 ntBASIC17.65■□□□□ 0.42
SynbQ8BI41 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.65■□□□□ 0.42
SynbQ8BI41 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynbQ8BI41 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.65■□□□□ 0.42
SynbQ8BI41 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynbQ8BI41 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynbQ8BI41 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynbQ8BI41 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynbQ8BI41 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynbQ8BI41 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SynbQ8BI41 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynbQ8BI41 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynbQ8BI41 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
SynbQ8BI41 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SynbQ8BI41 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.64■□□□□ 0.42
SynbQ8BI41 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
SynbQ8BI41 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynbQ8BI41 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynbQ8BI41 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynbQ8BI41 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynbQ8BI41 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynbQ8BI41 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.64■□□□□ 0.41
SynbQ8BI41 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynbQ8BI41 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynbQ8BI41 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SynbQ8BI41 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SynbQ8BI41 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.64■□□□□ 0.41
SynbQ8BI41 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.64■□□□□ 0.41
SynbQ8BI41 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynbQ8BI41 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynbQ8BI41 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynbQ8BI41 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SynbQ8BI41 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynbQ8BI41 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynbQ8BI41 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SynbQ8BI41 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SynbQ8BI41 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SynbQ8BI41 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SynbQ8BI41 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SynbQ8BI41 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
SynbQ8BI41 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SynbQ8BI41 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.63■□□□□ 0.41
SynbQ8BI41 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SynbQ8BI41 Gm10812-201ENSMUST00000099864 546 ntBASIC17.63■□□□□ 0.41
SynbQ8BI41 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SynbQ8BI41 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
SynbQ8BI41 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SynbQ8BI41 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SynbQ8BI41 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SynbQ8BI41 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SynbQ8BI41 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SynbQ8BI41 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SynbQ8BI41 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SynbQ8BI41 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SynbQ8BI41 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SynbQ8BI41 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynbQ8BI41 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynbQ8BI41 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.62■□□□□ 0.41
SynbQ8BI41 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.62■□□□□ 0.41
SynbQ8BI41 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynbQ8BI41 Gm26524-201ENSMUST00000192339 390 ntBASIC17.62■□□□□ 0.41
SynbQ8BI41 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.62■□□□□ 0.41
SynbQ8BI41 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynbQ8BI41 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynbQ8BI41 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SynbQ8BI41 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SynbQ8BI41 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynbQ8BI41 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynbQ8BI41 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SynbQ8BI41 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynbQ8BI41 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynbQ8BI41 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynbQ8BI41 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynbQ8BI41 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SynbQ8BI41 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SynbQ8BI41 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.61■□□□□ 0.41
SynbQ8BI41 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynbQ8BI41 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynbQ8BI41 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.61■□□□□ 0.41
SynbQ8BI41 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SynbQ8BI41 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.61■□□□□ 0.41
SynbQ8BI41 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynbQ8BI41 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynbQ8BI41 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynbQ8BI41 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynbQ8BI41 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynbQ8BI41 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 160.5 ms