Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scube3Q66PY1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scube3Q66PY1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scube3Q66PY1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scube3Q66PY1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scube3Q66PY1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.53■□□□□ 0.72
Scube3Q66PY1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scube3Q66PY1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scube3Q66PY1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scube3Q66PY1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Scube3Q66PY1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Scube3Q66PY1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Scube3Q66PY1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scube3Q66PY1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scube3Q66PY1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Scube3Q66PY1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scube3Q66PY1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Scube3Q66PY1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scube3Q66PY1 Gm6211-202ENSMUST00000167849 925 ntBASIC19.52■□□□□ 0.72
Scube3Q66PY1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.52■□□□□ 0.72
Scube3Q66PY1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scube3Q66PY1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Scube3Q66PY1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scube3Q66PY1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scube3Q66PY1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scube3Q66PY1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scube3Q66PY1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.51■□□□□ 0.71
Scube3Q66PY1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Scube3Q66PY1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scube3Q66PY1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scube3Q66PY1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scube3Q66PY1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.51■□□□□ 0.71
Scube3Q66PY1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scube3Q66PY1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scube3Q66PY1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scube3Q66PY1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scube3Q66PY1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scube3Q66PY1 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.5■□□□□ 0.71
Scube3Q66PY1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scube3Q66PY1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Scube3Q66PY1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scube3Q66PY1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Scube3Q66PY1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Scube3Q66PY1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scube3Q66PY1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Scube3Q66PY1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scube3Q66PY1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scube3Q66PY1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scube3Q66PY1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scube3Q66PY1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scube3Q66PY1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scube3Q66PY1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scube3Q66PY1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scube3Q66PY1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.5■□□□□ 0.71
Scube3Q66PY1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Scube3Q66PY1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scube3Q66PY1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scube3Q66PY1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scube3Q66PY1 Gm27011-201ENSMUST00000182352 972 ntBASIC19.49■□□□□ 0.71
Scube3Q66PY1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.49■□□□□ 0.71
Scube3Q66PY1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Scube3Q66PY1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scube3Q66PY1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scube3Q66PY1 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.49■□□□□ 0.71
Scube3Q66PY1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scube3Q66PY1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scube3Q66PY1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scube3Q66PY1 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.49■□□□□ 0.71
Scube3Q66PY1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scube3Q66PY1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scube3Q66PY1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scube3Q66PY1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scube3Q66PY1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scube3Q66PY1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scube3Q66PY1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scube3Q66PY1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.48■□□□□ 0.71
Scube3Q66PY1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Scube3Q66PY1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scube3Q66PY1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.48■□□□□ 0.71
Scube3Q66PY1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scube3Q66PY1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scube3Q66PY1 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.48■□□□□ 0.71
Scube3Q66PY1 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.48■□□□□ 0.71
Scube3Q66PY1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scube3Q66PY1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scube3Q66PY1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scube3Q66PY1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Scube3Q66PY1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scube3Q66PY1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scube3Q66PY1 Golph3-205ENSMUST00000228671 2842 ntBASIC19.47■□□□□ 0.71
Scube3Q66PY1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scube3Q66PY1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scube3Q66PY1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scube3Q66PY1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scube3Q66PY1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scube3Q66PY1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scube3Q66PY1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.47■□□□□ 0.71
Scube3Q66PY1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scube3Q66PY1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scube3Q66PY1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms