Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Gm37805-201ENSMUST00000192612 1094 ntBASIC24.18■■□□□ 1.46
Uspl1Q3ULM6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC24.18■■□□□ 1.46
Uspl1Q3ULM6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Uspl1Q3ULM6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Uspl1Q3ULM6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Uspl1Q3ULM6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Uspl1Q3ULM6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Uspl1Q3ULM6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Uspl1Q3ULM6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Uspl1Q3ULM6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Uspl1Q3ULM6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Uspl1Q3ULM6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Uspl1Q3ULM6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Uspl1Q3ULM6 Gm37563-201ENSMUST00000192580 1513 ntBASIC24.16■■□□□ 1.46
Uspl1Q3ULM6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Uspl1Q3ULM6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Uspl1Q3ULM6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Uspl1Q3ULM6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Uspl1Q3ULM6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Uspl1Q3ULM6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
Uspl1Q3ULM6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Uspl1Q3ULM6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Uspl1Q3ULM6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Uspl1Q3ULM6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Uspl1Q3ULM6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Uspl1Q3ULM6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
Uspl1Q3ULM6 Gm13509-201ENSMUST00000119733 1308 ntBASIC24.14■■□□□ 1.46
Uspl1Q3ULM6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
Uspl1Q3ULM6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Uspl1Q3ULM6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Uspl1Q3ULM6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
Uspl1Q3ULM6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
Uspl1Q3ULM6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
Uspl1Q3ULM6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Uspl1Q3ULM6 Gm45906-201ENSMUST00000208911 1430 ntBASIC24.14■■□□□ 1.45
Uspl1Q3ULM6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC24.14■■□□□ 1.45
Uspl1Q3ULM6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Uspl1Q3ULM6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Uspl1Q3ULM6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Uspl1Q3ULM6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Uspl1Q3ULM6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Uspl1Q3ULM6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Uspl1Q3ULM6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC24.13■■□□□ 1.45
Uspl1Q3ULM6 AC107452.1-201ENSMUST00000227963 481 ntBASIC24.13■■□□□ 1.45
Uspl1Q3ULM6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Uspl1Q3ULM6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Uspl1Q3ULM6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Uspl1Q3ULM6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Uspl1Q3ULM6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Uspl1Q3ULM6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Uspl1Q3ULM6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Uspl1Q3ULM6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Uspl1Q3ULM6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Uspl1Q3ULM6 Mir5133-201ENSMUST00000174955 77 ntBASIC24.12■■□□□ 1.45
Uspl1Q3ULM6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Uspl1Q3ULM6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Uspl1Q3ULM6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Uspl1Q3ULM6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Uspl1Q3ULM6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Uspl1Q3ULM6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Uspl1Q3ULM6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Uspl1Q3ULM6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Uspl1Q3ULM6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
Uspl1Q3ULM6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Uspl1Q3ULM6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC24.1■■□□□ 1.45
Uspl1Q3ULM6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Uspl1Q3ULM6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Uspl1Q3ULM6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Uspl1Q3ULM6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Uspl1Q3ULM6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Uspl1Q3ULM6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Uspl1Q3ULM6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC24.09■■□□□ 1.45
Uspl1Q3ULM6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Uspl1Q3ULM6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Uspl1Q3ULM6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC24.09■■□□□ 1.45
Uspl1Q3ULM6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Uspl1Q3ULM6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Uspl1Q3ULM6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC24.09■■□□□ 1.45
Uspl1Q3ULM6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Uspl1Q3ULM6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Uspl1Q3ULM6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Uspl1Q3ULM6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Uspl1Q3ULM6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Uspl1Q3ULM6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Uspl1Q3ULM6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Uspl1Q3ULM6 Gm42922-201ENSMUST00000195887 2078 ntBASIC24.08■■□□□ 1.45
Uspl1Q3ULM6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
Uspl1Q3ULM6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC24.08■■□□□ 1.44
Uspl1Q3ULM6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Uspl1Q3ULM6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Uspl1Q3ULM6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC24.07■■□□□ 1.44
Uspl1Q3ULM6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Uspl1Q3ULM6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC24.07■■□□□ 1.44
Uspl1Q3ULM6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Uspl1Q3ULM6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Uspl1Q3ULM6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
Uspl1Q3ULM6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Uspl1Q3ULM6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Uspl1Q3ULM6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Uspl1Q3ULM6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms