Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1aP97445 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1aP97445 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1aP97445 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cacna1aP97445 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Cacna1aP97445 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1aP97445 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1aP97445 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1aP97445 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1aP97445 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1aP97445 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cacna1aP97445 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1aP97445 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1aP97445 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1aP97445 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cacna1aP97445 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1aP97445 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1aP97445 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.17■□□□□ 0.34
Cacna1aP97445 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1aP97445 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1aP97445 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1aP97445 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1aP97445 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1aP97445 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1aP97445 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1aP97445 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1aP97445 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1aP97445 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1aP97445 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1aP97445 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1aP97445 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1aP97445 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1aP97445 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cacna1aP97445 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cacna1aP97445 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1aP97445 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.16■□□□□ 0.34
Cacna1aP97445 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cacna1aP97445 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1aP97445 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1aP97445 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.15■□□□□ 0.34
Cacna1aP97445 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1aP97445 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1aP97445 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Cacna1aP97445 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1aP97445 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1aP97445 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1aP97445 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1aP97445 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1aP97445 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1aP97445 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1aP97445 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cacna1aP97445 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Cacna1aP97445 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cacna1aP97445 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1aP97445 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1aP97445 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.14■□□□□ 0.33
Cacna1aP97445 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.14■□□□□ 0.33
Cacna1aP97445 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1aP97445 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.14■□□□□ 0.33
Cacna1aP97445 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1aP97445 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1aP97445 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1aP97445 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1aP97445 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cacna1aP97445 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1aP97445 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1aP97445 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cacna1aP97445 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cacna1aP97445 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1aP97445 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1aP97445 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1aP97445 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.13■□□□□ 0.33
Cacna1aP97445 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1aP97445 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.13■□□□□ 0.33
Cacna1aP97445 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1aP97445 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1aP97445 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1aP97445 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1aP97445 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.13■□□□□ 0.33
Cacna1aP97445 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1aP97445 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.13■□□□□ 0.33
Cacna1aP97445 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.13■□□□□ 0.33
Cacna1aP97445 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cacna1aP97445 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1aP97445 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1aP97445 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1aP97445 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1aP97445 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1aP97445 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1aP97445 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1aP97445 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.12■□□□□ 0.33
Cacna1aP97445 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1aP97445 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1aP97445 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.11■□□□□ 0.33
Cacna1aP97445 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1aP97445 Gm7461-201ENSMUST00000058918 827 ntBASIC17.11■□□□□ 0.33
Cacna1aP97445 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1aP97445 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1aP97445 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1aP97445 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms