Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav10A0A075B642 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trav10A0A075B642 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav10A0A075B642 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trav10A0A075B642 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav10A0A075B642 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav10A0A075B642 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav10A0A075B642 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav10A0A075B642 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.52■□□□□ 0.24
Trav10A0A075B642 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav10A0A075B642 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav10A0A075B642 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trav10A0A075B642 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav10A0A075B642 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav10A0A075B642 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.52■□□□□ 0.23
Trav10A0A075B642 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Trav10A0A075B642 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav10A0A075B642 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav10A0A075B642 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav10A0A075B642 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav10A0A075B642 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav10A0A075B642 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav10A0A075B642 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav10A0A075B642 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav10A0A075B642 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav10A0A075B642 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav10A0A075B642 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav10A0A075B642 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav10A0A075B642 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav10A0A075B642 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav10A0A075B642 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav10A0A075B642 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav10A0A075B642 Gm5874-201ENSMUST00000096101 508 ntBASIC16.51■□□□□ 0.23
Trav10A0A075B642 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav10A0A075B642 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav10A0A075B642 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav10A0A075B642 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav10A0A075B642 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav10A0A075B642 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav10A0A075B642 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav10A0A075B642 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav10A0A075B642 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav10A0A075B642 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav10A0A075B642 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav10A0A075B642 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav10A0A075B642 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav10A0A075B642 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav10A0A075B642 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav10A0A075B642 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav10A0A075B642 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav10A0A075B642 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav10A0A075B642 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.5■□□□□ 0.23
Trav10A0A075B642 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav10A0A075B642 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Gm13146-201ENSMUST00000118508 780 ntBASIC16.49■□□□□ 0.23
Trav10A0A075B642 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav10A0A075B642 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav10A0A075B642 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav10A0A075B642 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Gm42642-201ENSMUST00000200683 355 ntBASIC16.48■□□□□ 0.23
Trav10A0A075B642 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav10A0A075B642 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav10A0A075B642 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav10A0A075B642 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav10A0A075B642 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms