Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb1S4R1E0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb1S4R1E0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb1S4R1E0 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.89■□□□□ 0.3
H2afb1S4R1E0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
H2afb1S4R1E0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
H2afb1S4R1E0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.89■□□□□ 0.29
H2afb1S4R1E0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.89■□□□□ 0.29
H2afb1S4R1E0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
H2afb1S4R1E0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb1S4R1E0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb1S4R1E0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb1S4R1E0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb1S4R1E0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.88■□□□□ 0.29
H2afb1S4R1E0 BC021767-201ENSMUST00000126387 1716 ntBASIC16.88■□□□□ 0.29
H2afb1S4R1E0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb1S4R1E0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
H2afb1S4R1E0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.88■□□□□ 0.29
H2afb1S4R1E0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.88■□□□□ 0.29
H2afb1S4R1E0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb1S4R1E0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb1S4R1E0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb1S4R1E0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.88■□□□□ 0.29
H2afb1S4R1E0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
H2afb1S4R1E0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb1S4R1E0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb1S4R1E0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb1S4R1E0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.86■□□□□ 0.29
H2afb1S4R1E0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb1S4R1E0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
H2afb1S4R1E0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
H2afb1S4R1E0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.86■□□□□ 0.29
H2afb1S4R1E0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.86■□□□□ 0.29
H2afb1S4R1E0 Mir7075-201ENSMUST00000184187 82 ntBASIC16.86■□□□□ 0.29
H2afb1S4R1E0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb1S4R1E0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
H2afb1S4R1E0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.86■□□□□ 0.29
H2afb1S4R1E0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb1S4R1E0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb1S4R1E0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb1S4R1E0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb1S4R1E0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Gm12251-201ENSMUST00000117893 792 ntBASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Gm11421-201ENSMUST00000122124 294 ntBASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb1S4R1E0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms