Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgn5Q9JL35 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgn5Q9JL35 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgn5Q9JL35 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgn5Q9JL35 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgn5Q9JL35 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgn5Q9JL35 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgn5Q9JL35 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgn5Q9JL35 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Hmgn5Q9JL35 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hmgn5Q9JL35 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hmgn5Q9JL35 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgn5Q9JL35 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgn5Q9JL35 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Hmgn5Q9JL35 Gm7417-201ENSMUST00000192950 473 ntBASIC21.01■□□□□ 0.95
Hmgn5Q9JL35 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgn5Q9JL35 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgn5Q9JL35 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgn5Q9JL35 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgn5Q9JL35 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.01■□□□□ 0.95
Hmgn5Q9JL35 Gm9954-202ENSMUST00000198686 4725 ntBASIC21■□□□□ 0.95
Hmgn5Q9JL35 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21■□□□□ 0.95
Hmgn5Q9JL35 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21■□□□□ 0.95
Hmgn5Q9JL35 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
Hmgn5Q9JL35 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21■□□□□ 0.95
Hmgn5Q9JL35 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgn5Q9JL35 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgn5Q9JL35 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgn5Q9JL35 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgn5Q9JL35 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgn5Q9JL35 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgn5Q9JL35 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hmgn5Q9JL35 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Hmgn5Q9JL35 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgn5Q9JL35 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgn5Q9JL35 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgn5Q9JL35 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgn5Q9JL35 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgn5Q9JL35 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgn5Q9JL35 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Hmgn5Q9JL35 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.99■□□□□ 0.95
Hmgn5Q9JL35 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgn5Q9JL35 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.99■□□□□ 0.95
Hmgn5Q9JL35 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Hmgn5Q9JL35 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgn5Q9JL35 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgn5Q9JL35 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgn5Q9JL35 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgn5Q9JL35 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgn5Q9JL35 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgn5Q9JL35 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Hmgn5Q9JL35 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.98■□□□□ 0.95
Hmgn5Q9JL35 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgn5Q9JL35 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgn5Q9JL35 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Hmgn5Q9JL35 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Hmgn5Q9JL35 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Hmgn5Q9JL35 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Hmgn5Q9JL35 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgn5Q9JL35 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Hmgn5Q9JL35 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgn5Q9JL35 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgn5Q9JL35 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Hmgn5Q9JL35 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Hmgn5Q9JL35 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgn5Q9JL35 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.97■□□□□ 0.95
Hmgn5Q9JL35 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgn5Q9JL35 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgn5Q9JL35 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgn5Q9JL35 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.96■□□□□ 0.95
Hmgn5Q9JL35 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgn5Q9JL35 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgn5Q9JL35 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgn5Q9JL35 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgn5Q9JL35 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.96■□□□□ 0.95
Hmgn5Q9JL35 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgn5Q9JL35 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Hmgn5Q9JL35 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgn5Q9JL35 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Hmgn5Q9JL35 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgn5Q9JL35 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgn5Q9JL35 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgn5Q9JL35 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgn5Q9JL35 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgn5Q9JL35 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgn5Q9JL35 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgn5Q9JL35 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgn5Q9JL35 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgn5Q9JL35 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgn5Q9JL35 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgn5Q9JL35 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgn5Q9JL35 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgn5Q9JL35 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Hmgn5Q9JL35 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgn5Q9JL35 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Hmgn5Q9JL35 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgn5Q9JL35 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgn5Q9JL35 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgn5Q9JL35 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.94■□□□□ 0.94
Hmgn5Q9JL35 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms