Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.65■□□□□ 0.58
OtofQ9ESF1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
OtofQ9ESF1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
OtofQ9ESF1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
OtofQ9ESF1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
OtofQ9ESF1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
OtofQ9ESF1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
OtofQ9ESF1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
OtofQ9ESF1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
OtofQ9ESF1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
OtofQ9ESF1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
OtofQ9ESF1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.64■□□□□ 0.57
OtofQ9ESF1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.64■□□□□ 0.57
OtofQ9ESF1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.64■□□□□ 0.57
OtofQ9ESF1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
OtofQ9ESF1 Gm10698-201ENSMUST00000182663 604 ntBASIC18.64■□□□□ 0.57
OtofQ9ESF1 Mir7071-201ENSMUST00000184847 69 ntBASIC18.64■□□□□ 0.57
OtofQ9ESF1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
OtofQ9ESF1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
OtofQ9ESF1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
OtofQ9ESF1 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.63■□□□□ 0.57
OtofQ9ESF1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
OtofQ9ESF1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
OtofQ9ESF1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.63■□□□□ 0.57
OtofQ9ESF1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
OtofQ9ESF1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
OtofQ9ESF1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
OtofQ9ESF1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
OtofQ9ESF1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
OtofQ9ESF1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
OtofQ9ESF1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.63■□□□□ 0.57
OtofQ9ESF1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
OtofQ9ESF1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
OtofQ9ESF1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
OtofQ9ESF1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
OtofQ9ESF1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
OtofQ9ESF1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
OtofQ9ESF1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
OtofQ9ESF1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
OtofQ9ESF1 Gm22325-201ENSMUST00000158904 308 ntBASIC18.62■□□□□ 0.57
OtofQ9ESF1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
OtofQ9ESF1 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.62■□□□□ 0.57
OtofQ9ESF1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
OtofQ9ESF1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
OtofQ9ESF1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
OtofQ9ESF1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OtofQ9ESF1 Gm13158-201ENSMUST00000122007 736 ntBASIC18.61■□□□□ 0.57
OtofQ9ESF1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.61■□□□□ 0.57
OtofQ9ESF1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OtofQ9ESF1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OtofQ9ESF1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OtofQ9ESF1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OtofQ9ESF1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.61■□□□□ 0.57
OtofQ9ESF1 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.61■□□□□ 0.57
OtofQ9ESF1 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.61■□□□□ 0.57
OtofQ9ESF1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OtofQ9ESF1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OtofQ9ESF1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
OtofQ9ESF1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
OtofQ9ESF1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OtofQ9ESF1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.6■□□□□ 0.57
OtofQ9ESF1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
OtofQ9ESF1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.6■□□□□ 0.57
OtofQ9ESF1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OtofQ9ESF1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OtofQ9ESF1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OtofQ9ESF1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OtofQ9ESF1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.59■□□□□ 0.57
OtofQ9ESF1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
OtofQ9ESF1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.59■□□□□ 0.57
OtofQ9ESF1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OtofQ9ESF1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OtofQ9ESF1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OtofQ9ESF1 Gm715-201ENSMUST00000117865 831 ntBASIC18.59■□□□□ 0.57
OtofQ9ESF1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
OtofQ9ESF1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.59■□□□□ 0.57
OtofQ9ESF1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.59■□□□□ 0.57
OtofQ9ESF1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
OtofQ9ESF1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
OtofQ9ESF1 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.58■□□□□ 0.56
OtofQ9ESF1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
OtofQ9ESF1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.58■□□□□ 0.56
OtofQ9ESF1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.58■□□□□ 0.56
OtofQ9ESF1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
OtofQ9ESF1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
OtofQ9ESF1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
OtofQ9ESF1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
OtofQ9ESF1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
OtofQ9ESF1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
OtofQ9ESF1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
OtofQ9ESF1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
OtofQ9ESF1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
OtofQ9ESF1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
OtofQ9ESF1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
OtofQ9ESF1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
OtofQ9ESF1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
OtofQ9ESF1 Gm11927-201ENSMUST00000118472 759 ntBASIC18.57■□□□□ 0.56
OtofQ9ESF1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
OtofQ9ESF1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.57■□□□□ 0.56
OtofQ9ESF1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms