Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim60Q8VI40 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim60Q8VI40 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
Trim60Q8VI40 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim60Q8VI40 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trim60Q8VI40 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim60Q8VI40 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim60Q8VI40 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim60Q8VI40 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trim60Q8VI40 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim60Q8VI40 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim60Q8VI40 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim60Q8VI40 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim60Q8VI40 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim60Q8VI40 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim60Q8VI40 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim60Q8VI40 Gm8493-201ENSMUST00000196881 489 ntBASIC19.31■□□□□ 0.68
Trim60Q8VI40 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim60Q8VI40 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trim60Q8VI40 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim60Q8VI40 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim60Q8VI40 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim60Q8VI40 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Trim60Q8VI40 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim60Q8VI40 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim60Q8VI40 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.31■□□□□ 0.68
Trim60Q8VI40 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim60Q8VI40 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim60Q8VI40 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim60Q8VI40 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim60Q8VI40 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim60Q8VI40 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim60Q8VI40 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim60Q8VI40 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim60Q8VI40 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim60Q8VI40 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim60Q8VI40 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim60Q8VI40 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim60Q8VI40 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim60Q8VI40 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim60Q8VI40 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim60Q8VI40 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim60Q8VI40 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim60Q8VI40 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim60Q8VI40 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trim60Q8VI40 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trim60Q8VI40 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.29■□□□□ 0.68
Trim60Q8VI40 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim60Q8VI40 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim60Q8VI40 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim60Q8VI40 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim60Q8VI40 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim60Q8VI40 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim60Q8VI40 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim60Q8VI40 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim60Q8VI40 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim60Q8VI40 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trim60Q8VI40 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim60Q8VI40 Gm21956-201ENSMUST00000179946 522 ntBASIC19.28■□□□□ 0.68
Trim60Q8VI40 Gm43173-201ENSMUST00000202246 593 ntBASIC19.28■□□□□ 0.68
Trim60Q8VI40 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.28■□□□□ 0.68
Trim60Q8VI40 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.28■□□□□ 0.68
Trim60Q8VI40 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim60Q8VI40 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim60Q8VI40 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim60Q8VI40 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim60Q8VI40 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim60Q8VI40 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim60Q8VI40 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.27■□□□□ 0.68
Trim60Q8VI40 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim60Q8VI40 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Trim60Q8VI40 Gm12821-201ENSMUST00000120022 600 ntBASIC19.27■□□□□ 0.68
Trim60Q8VI40 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim60Q8VI40 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim60Q8VI40 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.27■□□□□ 0.67
Trim60Q8VI40 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim60Q8VI40 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim60Q8VI40 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim60Q8VI40 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.26■□□□□ 0.67
Trim60Q8VI40 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim60Q8VI40 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim60Q8VI40 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim60Q8VI40 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim60Q8VI40 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim60Q8VI40 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim60Q8VI40 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim60Q8VI40 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim60Q8VI40 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim60Q8VI40 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim60Q8VI40 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim60Q8VI40 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim60Q8VI40 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim60Q8VI40 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.25■□□□□ 0.67
Trim60Q8VI40 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.25■□□□□ 0.67
Trim60Q8VI40 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim60Q8VI40 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim60Q8VI40 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim60Q8VI40 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms