Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scube3Q66PY1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scube3Q66PY1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Scube3Q66PY1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Scube3Q66PY1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scube3Q66PY1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scube3Q66PY1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scube3Q66PY1 Gm7290-201ENSMUST00000104990 617 ntBASIC19.59■□□□□ 0.73
Scube3Q66PY1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scube3Q66PY1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scube3Q66PY1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scube3Q66PY1 Gm12918-201ENSMUST00000120234 636 ntBASIC19.59■□□□□ 0.73
Scube3Q66PY1 Gm15710-201ENSMUST00000121821 636 ntBASIC19.59■□□□□ 0.73
Scube3Q66PY1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.59■□□□□ 0.73
Scube3Q66PY1 Mir5133-201ENSMUST00000174955 77 ntBASIC19.59■□□□□ 0.73
Scube3Q66PY1 Gm5075-201ENSMUST00000196916 622 ntBASIC19.59■□□□□ 0.73
Scube3Q66PY1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Scube3Q66PY1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scube3Q66PY1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.59■□□□□ 0.73
Scube3Q66PY1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.59■□□□□ 0.73
Scube3Q66PY1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scube3Q66PY1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scube3Q66PY1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scube3Q66PY1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scube3Q66PY1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.58■□□□□ 0.72
Scube3Q66PY1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Scube3Q66PY1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.58■□□□□ 0.72
Scube3Q66PY1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scube3Q66PY1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scube3Q66PY1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scube3Q66PY1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scube3Q66PY1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scube3Q66PY1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Scube3Q66PY1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Scube3Q66PY1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scube3Q66PY1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scube3Q66PY1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scube3Q66PY1 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.57■□□□□ 0.72
Scube3Q66PY1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scube3Q66PY1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Scube3Q66PY1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scube3Q66PY1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scube3Q66PY1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scube3Q66PY1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scube3Q66PY1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scube3Q66PY1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scube3Q66PY1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scube3Q66PY1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Scube3Q66PY1 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC19.57■□□□□ 0.72
Scube3Q66PY1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scube3Q66PY1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scube3Q66PY1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Scube3Q66PY1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scube3Q66PY1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scube3Q66PY1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scube3Q66PY1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scube3Q66PY1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Scube3Q66PY1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Scube3Q66PY1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scube3Q66PY1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scube3Q66PY1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Scube3Q66PY1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Scube3Q66PY1 Gm13148-201ENSMUST00000118892 745 ntBASIC19.56■□□□□ 0.72
Scube3Q66PY1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scube3Q66PY1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Scube3Q66PY1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scube3Q66PY1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scube3Q66PY1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Scube3Q66PY1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scube3Q66PY1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scube3Q66PY1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Scube3Q66PY1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scube3Q66PY1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scube3Q66PY1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scube3Q66PY1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scube3Q66PY1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.55■□□□□ 0.72
Scube3Q66PY1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scube3Q66PY1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Scube3Q66PY1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scube3Q66PY1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scube3Q66PY1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scube3Q66PY1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scube3Q66PY1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scube3Q66PY1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scube3Q66PY1 BC021767-201ENSMUST00000126387 1716 ntBASIC19.54■□□□□ 0.72
Scube3Q66PY1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scube3Q66PY1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scube3Q66PY1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scube3Q66PY1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.54■□□□□ 0.72
Scube3Q66PY1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scube3Q66PY1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.54■□□□□ 0.72
Scube3Q66PY1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scube3Q66PY1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scube3Q66PY1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Scube3Q66PY1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scube3Q66PY1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scube3Q66PY1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scube3Q66PY1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scube3Q66PY1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Scube3Q66PY1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms