Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VcanQ62059 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.73■□□□□ 0.43
VcanQ62059 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.73■□□□□ 0.43
VcanQ62059 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VcanQ62059 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VcanQ62059 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VcanQ62059 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VcanQ62059 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VcanQ62059 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
VcanQ62059 Gm28033-201ENSMUST00000184224 96 ntBASIC17.72■□□□□ 0.43
VcanQ62059 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VcanQ62059 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.72■□□□□ 0.43
VcanQ62059 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VcanQ62059 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VcanQ62059 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VcanQ62059 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.72■□□□□ 0.43
VcanQ62059 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VcanQ62059 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VcanQ62059 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.71■□□□□ 0.43
VcanQ62059 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VcanQ62059 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VcanQ62059 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VcanQ62059 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VcanQ62059 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VcanQ62059 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VcanQ62059 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.71■□□□□ 0.43
VcanQ62059 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
VcanQ62059 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.71■□□□□ 0.42
VcanQ62059 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VcanQ62059 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VcanQ62059 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VcanQ62059 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VcanQ62059 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VcanQ62059 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VcanQ62059 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VcanQ62059 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
VcanQ62059 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VcanQ62059 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VcanQ62059 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VcanQ62059 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
VcanQ62059 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VcanQ62059 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VcanQ62059 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
VcanQ62059 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VcanQ62059 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
VcanQ62059 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
VcanQ62059 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
VcanQ62059 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
VcanQ62059 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VcanQ62059 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VcanQ62059 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.68■□□□□ 0.42
VcanQ62059 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.68■□□□□ 0.42
VcanQ62059 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
VcanQ62059 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.68■□□□□ 0.42
VcanQ62059 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VcanQ62059 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VcanQ62059 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VcanQ62059 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VcanQ62059 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
VcanQ62059 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VcanQ62059 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VcanQ62059 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VcanQ62059 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VcanQ62059 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VcanQ62059 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VcanQ62059 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VcanQ62059 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
VcanQ62059 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VcanQ62059 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VcanQ62059 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VcanQ62059 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VcanQ62059 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VcanQ62059 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VcanQ62059 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VcanQ62059 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VcanQ62059 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VcanQ62059 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VcanQ62059 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VcanQ62059 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VcanQ62059 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VcanQ62059 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
VcanQ62059 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VcanQ62059 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VcanQ62059 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VcanQ62059 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VcanQ62059 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VcanQ62059 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.65■□□□□ 0.42
VcanQ62059 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VcanQ62059 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VcanQ62059 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.65■□□□□ 0.42
VcanQ62059 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VcanQ62059 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.65■□□□□ 0.42
VcanQ62059 Odf3b-204ENSMUST00000227834 930 ntBASIC17.65■□□□□ 0.42
VcanQ62059 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VcanQ62059 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VcanQ62059 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VcanQ62059 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VcanQ62059 Gm43514-201ENSMUST00000198852 424 ntBASIC17.64■□□□□ 0.41
VcanQ62059 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VcanQ62059 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 156.9 ms