Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.49■□□□□ 0.39
Sox2P48432 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox2P48432 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sox2P48432 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox2P48432 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox2P48432 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox2P48432 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox2P48432 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.49■□□□□ 0.39
Sox2P48432 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox2P48432 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox2P48432 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox2P48432 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sox2P48432 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Sox2P48432 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.48■□□□□ 0.39
Sox2P48432 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.48■□□□□ 0.39
Sox2P48432 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sox2P48432 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.48■□□□□ 0.39
Sox2P48432 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox2P48432 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sox2P48432 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox2P48432 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox2P48432 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.48■□□□□ 0.39
Sox2P48432 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox2P48432 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox2P48432 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox2P48432 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sox2P48432 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox2P48432 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox2P48432 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox2P48432 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox2P48432 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox2P48432 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Sox2P48432 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox2P48432 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox2P48432 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox2P48432 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sox2P48432 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sox2P48432 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sox2P48432 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.46■□□□□ 0.39
Sox2P48432 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Sox2P48432 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.46■□□□□ 0.39
Sox2P48432 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.46■□□□□ 0.39
Sox2P48432 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.46■□□□□ 0.39
Sox2P48432 Golgb1-201ENSMUST00000023534 498 ntBASIC17.46■□□□□ 0.39
Sox2P48432 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.46■□□□□ 0.39
Sox2P48432 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox2P48432 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox2P48432 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.45■□□□□ 0.38
Sox2P48432 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.45■□□□□ 0.38
Sox2P48432 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.45■□□□□ 0.38
Sox2P48432 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sox2P48432 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox2P48432 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox2P48432 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sox2P48432 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox2P48432 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Sox2P48432 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sox2P48432 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.45■□□□□ 0.38
Sox2P48432 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox2P48432 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox2P48432 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox2P48432 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Sox2P48432 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox2P48432 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox2P48432 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox2P48432 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.44■□□□□ 0.38
Sox2P48432 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox2P48432 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox2P48432 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sox2P48432 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox2P48432 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.44■□□□□ 0.38
Sox2P48432 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox2P48432 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox2P48432 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox2P48432 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox2P48432 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox2P48432 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.43■□□□□ 0.38
Sox2P48432 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox2P48432 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox2P48432 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms