Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Tpm3P21107 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tpm3P21107 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Tpm3P21107 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tpm3P21107 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tpm3P21107 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tpm3P21107 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tpm3P21107 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tpm3P21107 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tpm3P21107 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tpm3P21107 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm3P21107 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Tpm3P21107 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm3P21107 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Tpm3P21107 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm3P21107 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm3P21107 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm3P21107 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm3P21107 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm3P21107 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Tpm3P21107 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm3P21107 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm3P21107 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tpm3P21107 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tpm3P21107 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tpm3P21107 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tpm3P21107 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tpm3P21107 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Tpm3P21107 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tpm3P21107 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tpm3P21107 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Tpm3P21107 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tpm3P21107 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Tpm3P21107 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tpm3P21107 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tpm3P21107 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tpm3P21107 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tpm3P21107 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.94■□□□□ 0.94
Tpm3P21107 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.94■□□□□ 0.94
Tpm3P21107 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tpm3P21107 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Tpm3P21107 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tpm3P21107 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Tpm3P21107 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tpm3P21107 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tpm3P21107 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.93■□□□□ 0.94
Tpm3P21107 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tpm3P21107 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.93■□□□□ 0.94
Tpm3P21107 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tpm3P21107 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tpm3P21107 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Tpm3P21107 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tpm3P21107 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tpm3P21107 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Tpm3P21107 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tpm3P21107 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tpm3P21107 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tpm3P21107 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tpm3P21107 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tpm3P21107 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tpm3P21107 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tpm3P21107 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tpm3P21107 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.92■□□□□ 0.94
Tpm3P21107 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Tpm3P21107 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm3P21107 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.91■□□□□ 0.94
Tpm3P21107 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm3P21107 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm3P21107 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
Tpm3P21107 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm3P21107 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm3P21107 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm3P21107 Gm9870-201ENSMUST00000063874 645 ntBASIC20.91■□□□□ 0.94
Tpm3P21107 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm3P21107 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm3P21107 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Tpm3P21107 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm3P21107 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm3P21107 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm3P21107 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm3P21107 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm3P21107 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.9■□□□□ 0.94
Tpm3P21107 Etf1-202ENSMUST00000180351 108 ntBASIC20.9■□□□□ 0.94
Tpm3P21107 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm3P21107 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm3P21107 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.9■□□□□ 0.94
Tpm3P21107 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Tpm3P21107 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm3P21107 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Tpm3P21107 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tpm3P21107 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tpm3P21107 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tpm3P21107 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Tpm3P21107 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.89■□□□□ 0.94
Tpm3P21107 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Tpm3P21107 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tpm3P21107 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tpm3P21107 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tpm3P21107 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tpm3P21107 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms