Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.24■□□□□ 0.35
Hps1O08983 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.24■□□□□ 0.35
Hps1O08983 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hps1O08983 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Hps1O08983 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hps1O08983 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.24■□□□□ 0.35
Hps1O08983 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Hps1O08983 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.24■□□□□ 0.35
Hps1O08983 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hps1O08983 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hps1O08983 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hps1O08983 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Hps1O08983 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hps1O08983 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hps1O08983 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hps1O08983 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.23■□□□□ 0.35
Hps1O08983 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hps1O08983 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hps1O08983 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hps1O08983 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hps1O08983 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hps1O08983 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Hps1O08983 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hps1O08983 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hps1O08983 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.23■□□□□ 0.35
Hps1O08983 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hps1O08983 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hps1O08983 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Hps1O08983 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hps1O08983 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hps1O08983 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hps1O08983 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hps1O08983 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hps1O08983 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hps1O08983 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.22■□□□□ 0.35
Hps1O08983 Gm26833-201ENSMUST00000180899 440 ntBASIC17.22■□□□□ 0.35
Hps1O08983 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.22■□□□□ 0.35
Hps1O08983 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hps1O08983 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.22■□□□□ 0.35
Hps1O08983 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hps1O08983 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Hps1O08983 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.22■□□□□ 0.35
Hps1O08983 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hps1O08983 Gm10493-201ENSMUST00000097270 612 ntBASIC17.22■□□□□ 0.35
Hps1O08983 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hps1O08983 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hps1O08983 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hps1O08983 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hps1O08983 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hps1O08983 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Hps1O08983 Gm43173-201ENSMUST00000202246 593 ntBASIC17.21■□□□□ 0.35
Hps1O08983 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hps1O08983 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hps1O08983 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hps1O08983 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hps1O08983 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.21■□□□□ 0.35
Hps1O08983 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Hps1O08983 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hps1O08983 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hps1O08983 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hps1O08983 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hps1O08983 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hps1O08983 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Hps1O08983 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hps1O08983 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Hps1O08983 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hps1O08983 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Hps1O08983 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hps1O08983 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hps1O08983 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hps1O08983 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hps1O08983 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.2■□□□□ 0.34
Hps1O08983 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.2■□□□□ 0.34
Hps1O08983 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hps1O08983 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hps1O08983 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hps1O08983 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hps1O08983 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hps1O08983 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hps1O08983 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hps1O08983 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.19■□□□□ 0.34
Hps1O08983 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hps1O08983 Gm43060-201ENSMUST00000200621 289 ntBASIC17.19■□□□□ 0.34
Hps1O08983 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hps1O08983 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hps1O08983 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hps1O08983 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hps1O08983 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hps1O08983 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hps1O08983 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Hps1O08983 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hps1O08983 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hps1O08983 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hps1O08983 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.18■□□□□ 0.34
Hps1O08983 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hps1O08983 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
Hps1O08983 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.18■□□□□ 0.34
Hps1O08983 AA386476-201ENSMUST00000098781 1665 ntBASIC17.18■□□□□ 0.34
Hps1O08983 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.18■□□□□ 0.34
Hps1O08983 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms