Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav10A0A075B642 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav10A0A075B642 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav10A0A075B642 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav10A0A075B642 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav10A0A075B642 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav10A0A075B642 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav10A0A075B642 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav10A0A075B642 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav10A0A075B642 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav10A0A075B642 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav10A0A075B642 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav10A0A075B642 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav10A0A075B642 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav10A0A075B642 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav10A0A075B642 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav10A0A075B642 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav10A0A075B642 Gm42778-201ENSMUST00000199644 553 ntBASIC16.57■□□□□ 0.24
Trav10A0A075B642 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav10A0A075B642 Gm10493-201ENSMUST00000097270 612 ntBASIC16.57■□□□□ 0.24
Trav10A0A075B642 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav10A0A075B642 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav10A0A075B642 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav10A0A075B642 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
Trav10A0A075B642 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.56■□□□□ 0.24
Trav10A0A075B642 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav10A0A075B642 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.56■□□□□ 0.24
Trav10A0A075B642 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
Trav10A0A075B642 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav10A0A075B642 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.56■□□□□ 0.24
Trav10A0A075B642 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.56■□□□□ 0.24
Trav10A0A075B642 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.56■□□□□ 0.24
Trav10A0A075B642 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav10A0A075B642 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav10A0A075B642 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Trav10A0A075B642 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav10A0A075B642 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav10A0A075B642 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav10A0A075B642 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav10A0A075B642 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav10A0A075B642 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav10A0A075B642 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav10A0A075B642 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.55■□□□□ 0.24
Trav10A0A075B642 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav10A0A075B642 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav10A0A075B642 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Trav10A0A075B642 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.55■□□□□ 0.24
Trav10A0A075B642 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.55■□□□□ 0.24
Trav10A0A075B642 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav10A0A075B642 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav10A0A075B642 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Trav10A0A075B642 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav10A0A075B642 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav10A0A075B642 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav10A0A075B642 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trav10A0A075B642 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav10A0A075B642 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav10A0A075B642 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav10A0A075B642 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Gm13234-201ENSMUST00000120010 747 ntBASIC16.54■□□□□ 0.24
Trav10A0A075B642 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav10A0A075B642 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav10A0A075B642 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav10A0A075B642 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav10A0A075B642 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.53■□□□□ 0.24
Trav10A0A075B642 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav10A0A075B642 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms