Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb1S4R1E0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb1S4R1E0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb1S4R1E0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb1S4R1E0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
H2afb1S4R1E0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
H2afb1S4R1E0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
H2afb1S4R1E0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb1S4R1E0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb1S4R1E0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb1S4R1E0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
H2afb1S4R1E0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb1S4R1E0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb1S4R1E0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb1S4R1E0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb1S4R1E0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.95■□□□□ 0.3
H2afb1S4R1E0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
H2afb1S4R1E0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb1S4R1E0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb1S4R1E0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb1S4R1E0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb1S4R1E0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb1S4R1E0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb1S4R1E0 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.94■□□□□ 0.3
H2afb1S4R1E0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb1S4R1E0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb1S4R1E0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.94■□□□□ 0.3
H2afb1S4R1E0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb1S4R1E0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
H2afb1S4R1E0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.94■□□□□ 0.3
H2afb1S4R1E0 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.94■□□□□ 0.3
H2afb1S4R1E0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
H2afb1S4R1E0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb1S4R1E0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb1S4R1E0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1S4R1E0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb1S4R1E0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb1S4R1E0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb1S4R1E0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
H2afb1S4R1E0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb1S4R1E0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb1S4R1E0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb1S4R1E0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb1S4R1E0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb1S4R1E0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb1S4R1E0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb1S4R1E0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
H2afb1S4R1E0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb1S4R1E0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb1S4R1E0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1S4R1E0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.9■□□□□ 0.3
H2afb1S4R1E0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
H2afb1S4R1E0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb1S4R1E0 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.9■□□□□ 0.3
H2afb1S4R1E0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
H2afb1S4R1E0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb1S4R1E0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
H2afb1S4R1E0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb1S4R1E0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms