Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.45■■□□□ 1.02
Ddx41Q91VN6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ddx41Q91VN6 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.45■■□□□ 1.02
Ddx41Q91VN6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx41Q91VN6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx41Q91VN6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Ddx41Q91VN6 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.44■■□□□ 1.02
Ddx41Q91VN6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx41Q91VN6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx41Q91VN6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx41Q91VN6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx41Q91VN6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx41Q91VN6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.44■■□□□ 1.02
Ddx41Q91VN6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ddx41Q91VN6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx41Q91VN6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx41Q91VN6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx41Q91VN6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx41Q91VN6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx41Q91VN6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx41Q91VN6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Ddx41Q91VN6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx41Q91VN6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.43■■□□□ 1.02
Ddx41Q91VN6 Gm6420-201ENSMUST00000193885 723 ntBASIC21.43■■□□□ 1.02
Ddx41Q91VN6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.43■■□□□ 1.02
Ddx41Q91VN6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ddx41Q91VN6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx41Q91VN6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx41Q91VN6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx41Q91VN6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ddx41Q91VN6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx41Q91VN6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx41Q91VN6 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.42■■□□□ 1.02
Ddx41Q91VN6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx41Q91VN6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx41Q91VN6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx41Q91VN6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx41Q91VN6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ddx41Q91VN6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
Ddx41Q91VN6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx41Q91VN6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx41Q91VN6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.41■■□□□ 1.02
Ddx41Q91VN6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx41Q91VN6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx41Q91VN6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ddx41Q91VN6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx41Q91VN6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx41Q91VN6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.4■■□□□ 1.02
Ddx41Q91VN6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.4■■□□□ 1.02
Ddx41Q91VN6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx41Q91VN6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx41Q91VN6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx41Q91VN6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx41Q91VN6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Ddx41Q91VN6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ddx41Q91VN6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx41Q91VN6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
Ddx41Q91VN6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.39■■□□□ 1.01
Ddx41Q91VN6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Ddx41Q91VN6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.39■■□□□ 1.01
Ddx41Q91VN6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
Ddx41Q91VN6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx41Q91VN6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx41Q91VN6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx41Q91VN6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx41Q91VN6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx41Q91VN6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Ddx41Q91VN6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
Ddx41Q91VN6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx41Q91VN6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx41Q91VN6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.38■■□□□ 1.01
Ddx41Q91VN6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx41Q91VN6 Gm12441-201ENSMUST00000121806 588 ntBASIC21.38■■□□□ 1.01
Ddx41Q91VN6 Gm6365-201ENSMUST00000054711 744 ntBASIC21.38■■□□□ 1.01
Ddx41Q91VN6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ddx41Q91VN6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx41Q91VN6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx41Q91VN6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx41Q91VN6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx41Q91VN6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx41Q91VN6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx41Q91VN6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Ddx41Q91VN6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx41Q91VN6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx41Q91VN6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx41Q91VN6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.37■■□□□ 1.01
Ddx41Q91VN6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.37■■□□□ 1.01
Ddx41Q91VN6 Gm13148-201ENSMUST00000118892 745 ntBASIC21.37■■□□□ 1.01
Ddx41Q91VN6 Gm7860-201ENSMUST00000121190 879 ntBASIC21.37■■□□□ 1.01
Ddx41Q91VN6 Nespas-201ENSMUST00000143738 1083 ntBASIC21.37■■□□□ 1.01
Ddx41Q91VN6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.37■■□□□ 1.01
Ddx41Q91VN6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx41Q91VN6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ddx41Q91VN6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.37■■□□□ 1.01
Ddx41Q91VN6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Gm7290-201ENSMUST00000104990 617 ntBASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 187.1 ms