Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Gm10849-201ENSMUST00000100397 618 ntBASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Golph3-205ENSMUST00000228671 2842 ntBASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpap2Q8VC34 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.61■□□□□ 0.89
Rpap2Q8VC34 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.6■□□□□ 0.89
Rpap2Q8VC34 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.6■□□□□ 0.89
Rpap2Q8VC34 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpap2Q8VC34 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpap2Q8VC34 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.6■□□□□ 0.89
Rpap2Q8VC34 Gm7514-201ENSMUST00000209475 934 ntBASIC20.6■□□□□ 0.89
Rpap2Q8VC34 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.6■□□□□ 0.89
Rpap2Q8VC34 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rpap2Q8VC34 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpap2Q8VC34 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpap2Q8VC34 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Rpap2Q8VC34 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpap2Q8VC34 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpap2Q8VC34 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpap2Q8VC34 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.6■□□□□ 0.89
Rpap2Q8VC34 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpap2Q8VC34 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap2Q8VC34 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.59■□□□□ 0.89
Rpap2Q8VC34 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap2Q8VC34 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Rpap2Q8VC34 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap2Q8VC34 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap2Q8VC34 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Rpap2Q8VC34 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rpap2Q8VC34 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rpap2Q8VC34 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap2Q8VC34 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap2Q8VC34 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rpap2Q8VC34 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpap2Q8VC34 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpap2Q8VC34 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rpap2Q8VC34 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpap2Q8VC34 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpap2Q8VC34 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpap2Q8VC34 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpap2Q8VC34 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.58■□□□□ 0.89
Rpap2Q8VC34 Gm26571-201ENSMUST00000181399 666 ntBASIC20.58■□□□□ 0.89
Rpap2Q8VC34 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.58■□□□□ 0.89
Rpap2Q8VC34 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Rpap2Q8VC34 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Rpap2Q8VC34 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpap2Q8VC34 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpap2Q8VC34 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpap2Q8VC34 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpap2Q8VC34 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpap2Q8VC34 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rpap2Q8VC34 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpap2Q8VC34 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rpap2Q8VC34 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rpap2Q8VC34 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.57■□□□□ 0.88
Rpap2Q8VC34 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Rpap2Q8VC34 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rpap2Q8VC34 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rpap2Q8VC34 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpap2Q8VC34 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.57■□□□□ 0.88
Rpap2Q8VC34 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rpap2Q8VC34 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpap2Q8VC34 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpap2Q8VC34 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpap2Q8VC34 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpap2Q8VC34 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpap2Q8VC34 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rpap2Q8VC34 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rpap2Q8VC34 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpap2Q8VC34 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.56■□□□□ 0.88
Rpap2Q8VC34 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpap2Q8VC34 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpap2Q8VC34 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms