Protein–RNA interactions for Protein: Q61510

Trim25, E3 ubiquitin/ISG15 ligase TRIM25, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim25Q61510 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
Trim25Q61510 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim25Q61510 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim25Q61510 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim25Q61510 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim25Q61510 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim25Q61510 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.32■□□□□ 0.84
Trim25Q61510 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim25Q61510 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.32■□□□□ 0.84
Trim25Q61510 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim25Q61510 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Trim25Q61510 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim25Q61510 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.31■□□□□ 0.84
Trim25Q61510 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim25Q61510 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim25Q61510 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim25Q61510 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim25Q61510 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.31■□□□□ 0.84
Trim25Q61510 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim25Q61510 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Trim25Q61510 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim25Q61510 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim25Q61510 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim25Q61510 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trim25Q61510 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trim25Q61510 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim25Q61510 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.3■□□□□ 0.84
Trim25Q61510 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim25Q61510 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim25Q61510 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim25Q61510 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim25Q61510 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim25Q61510 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim25Q61510 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim25Q61510 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim25Q61510 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim25Q61510 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim25Q61510 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim25Q61510 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim25Q61510 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim25Q61510 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.29■□□□□ 0.84
Trim25Q61510 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim25Q61510 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim25Q61510 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.29■□□□□ 0.84
Trim25Q61510 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim25Q61510 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim25Q61510 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim25Q61510 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim25Q61510 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim25Q61510 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim25Q61510 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim25Q61510 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim25Q61510 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim25Q61510 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim25Q61510 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim25Q61510 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim25Q61510 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim25Q61510 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim25Q61510 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim25Q61510 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim25Q61510 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim25Q61510 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim25Q61510 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim25Q61510 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim25Q61510 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trim25Q61510 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim25Q61510 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.27■□□□□ 0.84
Trim25Q61510 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim25Q61510 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.27■□□□□ 0.84
Trim25Q61510 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim25Q61510 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim25Q61510 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trim25Q61510 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim25Q61510 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim25Q61510 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim25Q61510 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim25Q61510 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.27■□□□□ 0.83
Trim25Q61510 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim25Q61510 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim25Q61510 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim25Q61510 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim25Q61510 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.26■□□□□ 0.83
Trim25Q61510 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.26■□□□□ 0.83
Trim25Q61510 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim25Q61510 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Trim25Q61510 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim25Q61510 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim25Q61510 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim25Q61510 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trim25Q61510 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim25Q61510 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim25Q61510 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim25Q61510 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim25Q61510 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim25Q61510 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Trim25Q61510 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Trim25Q61510 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trim25Q61510 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trim25Q61510 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim25Q61510 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms