Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shroom1Q5SX79 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shroom1Q5SX79 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.94■□□□□ 0.78
Shroom1Q5SX79 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Shroom1Q5SX79 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Shroom1Q5SX79 Gm22240-201ENSMUST00000175225 82 ntBASIC19.94■□□□□ 0.78
Shroom1Q5SX79 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shroom1Q5SX79 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shroom1Q5SX79 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shroom1Q5SX79 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shroom1Q5SX79 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shroom1Q5SX79 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shroom1Q5SX79 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shroom1Q5SX79 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Shroom1Q5SX79 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Shroom1Q5SX79 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Shroom1Q5SX79 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.92■□□□□ 0.78
Shroom1Q5SX79 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom1Q5SX79 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom1Q5SX79 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom1Q5SX79 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.92■□□□□ 0.78
Shroom1Q5SX79 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.92■□□□□ 0.78
Shroom1Q5SX79 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom1Q5SX79 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom1Q5SX79 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom1Q5SX79 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom1Q5SX79 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom1Q5SX79 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom1Q5SX79 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom1Q5SX79 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom1Q5SX79 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Shroom1Q5SX79 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shroom1Q5SX79 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.91■□□□□ 0.78
Shroom1Q5SX79 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.91■□□□□ 0.78
Shroom1Q5SX79 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.91■□□□□ 0.78
Shroom1Q5SX79 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Shroom1Q5SX79 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.91■□□□□ 0.78
Shroom1Q5SX79 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shroom1Q5SX79 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shroom1Q5SX79 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shroom1Q5SX79 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shroom1Q5SX79 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shroom1Q5SX79 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Shroom1Q5SX79 Rab3c-203ENSMUST00000224180 967 ntBASIC19.9■□□□□ 0.78
Shroom1Q5SX79 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Shroom1Q5SX79 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Shroom1Q5SX79 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shroom1Q5SX79 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shroom1Q5SX79 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom1Q5SX79 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom1Q5SX79 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom1Q5SX79 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
Shroom1Q5SX79 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom1Q5SX79 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom1Q5SX79 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Shroom1Q5SX79 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom1Q5SX79 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom1Q5SX79 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom1Q5SX79 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom1Q5SX79 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom1Q5SX79 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom1Q5SX79 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom1Q5SX79 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom1Q5SX79 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shroom1Q5SX79 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Shroom1Q5SX79 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.88■□□□□ 0.77
Shroom1Q5SX79 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shroom1Q5SX79 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shroom1Q5SX79 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.88■□□□□ 0.77
Shroom1Q5SX79 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.88■□□□□ 0.77
Shroom1Q5SX79 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Shroom1Q5SX79 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.88■□□□□ 0.77
Shroom1Q5SX79 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.88■□□□□ 0.77
Shroom1Q5SX79 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shroom1Q5SX79 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shroom1Q5SX79 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Shroom1Q5SX79 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shroom1Q5SX79 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shroom1Q5SX79 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Shroom1Q5SX79 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shroom1Q5SX79 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shroom1Q5SX79 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shroom1Q5SX79 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shroom1Q5SX79 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shroom1Q5SX79 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Shroom1Q5SX79 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.86■□□□□ 0.77
Shroom1Q5SX79 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shroom1Q5SX79 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shroom1Q5SX79 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shroom1Q5SX79 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shroom1Q5SX79 Gm37856-201ENSMUST00000191634 999 ntBASIC19.86■□□□□ 0.77
Shroom1Q5SX79 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shroom1Q5SX79 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shroom1Q5SX79 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.86■□□□□ 0.77
Shroom1Q5SX79 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shroom1Q5SX79 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shroom1Q5SX79 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shroom1Q5SX79 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shroom1Q5SX79 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shroom1Q5SX79 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms