Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC24.37■■□□□ 1.49
Uspl1Q3ULM6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Uspl1Q3ULM6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC24.37■■□□□ 1.49
Uspl1Q3ULM6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Uspl1Q3ULM6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Uspl1Q3ULM6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Uspl1Q3ULM6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Uspl1Q3ULM6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Uspl1Q3ULM6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
Uspl1Q3ULM6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC24.36■■□□□ 1.49
Uspl1Q3ULM6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Uspl1Q3ULM6 Gm42555-201ENSMUST00000199304 1039 ntBASIC24.36■■□□□ 1.49
Uspl1Q3ULM6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
Uspl1Q3ULM6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Uspl1Q3ULM6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Uspl1Q3ULM6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Uspl1Q3ULM6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Uspl1Q3ULM6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Uspl1Q3ULM6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Uspl1Q3ULM6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Uspl1Q3ULM6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC24.35■■□□□ 1.49
Uspl1Q3ULM6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Uspl1Q3ULM6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC24.35■■□□□ 1.49
Uspl1Q3ULM6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC24.35■■□□□ 1.49
Uspl1Q3ULM6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Uspl1Q3ULM6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Uspl1Q3ULM6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Uspl1Q3ULM6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Uspl1Q3ULM6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Uspl1Q3ULM6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Uspl1Q3ULM6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Uspl1Q3ULM6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Uspl1Q3ULM6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Uspl1Q3ULM6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Uspl1Q3ULM6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Uspl1Q3ULM6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Uspl1Q3ULM6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Uspl1Q3ULM6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Uspl1Q3ULM6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Uspl1Q3ULM6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Uspl1Q3ULM6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Uspl1Q3ULM6 Gm7856-201ENSMUST00000117514 1493 ntBASIC24.33■■□□□ 1.49
Uspl1Q3ULM6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Uspl1Q3ULM6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Uspl1Q3ULM6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC24.33■■□□□ 1.49
Uspl1Q3ULM6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Uspl1Q3ULM6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Uspl1Q3ULM6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Uspl1Q3ULM6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
Uspl1Q3ULM6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
Uspl1Q3ULM6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Uspl1Q3ULM6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Uspl1Q3ULM6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC24.32■■□□□ 1.48
Uspl1Q3ULM6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Uspl1Q3ULM6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Uspl1Q3ULM6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Uspl1Q3ULM6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Uspl1Q3ULM6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Uspl1Q3ULM6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Uspl1Q3ULM6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Uspl1Q3ULM6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Uspl1Q3ULM6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Uspl1Q3ULM6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Uspl1Q3ULM6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Uspl1Q3ULM6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Uspl1Q3ULM6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Uspl1Q3ULM6 Gm8309-201ENSMUST00000206627 1448 ntBASIC24.31■■□□□ 1.48
Uspl1Q3ULM6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Uspl1Q3ULM6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Uspl1Q3ULM6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Uspl1Q3ULM6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Uspl1Q3ULM6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Uspl1Q3ULM6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC24.31■■□□□ 1.48
Uspl1Q3ULM6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Uspl1Q3ULM6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Uspl1Q3ULM6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Uspl1Q3ULM6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Uspl1Q3ULM6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Uspl1Q3ULM6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Uspl1Q3ULM6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Uspl1Q3ULM6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Uspl1Q3ULM6 Gm6365-201ENSMUST00000054711 744 ntBASIC24.3■■□□□ 1.48
Uspl1Q3ULM6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Uspl1Q3ULM6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Uspl1Q3ULM6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Uspl1Q3ULM6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Uspl1Q3ULM6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Uspl1Q3ULM6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Uspl1Q3ULM6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Uspl1Q3ULM6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Uspl1Q3ULM6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC24.29■■□□□ 1.48
Uspl1Q3ULM6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Uspl1Q3ULM6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Uspl1Q3ULM6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC24.29■■□□□ 1.48
Uspl1Q3ULM6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Uspl1Q3ULM6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Uspl1Q3ULM6 Gm43672-201ENSMUST00000199072 1731 ntBASIC24.28■■□□□ 1.48
Uspl1Q3ULM6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC24.28■■□□□ 1.48
Uspl1Q3ULM6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC24.28■■□□□ 1.48
Uspl1Q3ULM6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms