Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Brf2Q3UAW9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Brf2Q3UAW9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Brf2Q3UAW9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Brf2Q3UAW9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Brf2Q3UAW9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brf2Q3UAW9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brf2Q3UAW9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brf2Q3UAW9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brf2Q3UAW9 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.66■□□□□ 0.42
Brf2Q3UAW9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brf2Q3UAW9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brf2Q3UAW9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brf2Q3UAW9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brf2Q3UAW9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brf2Q3UAW9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brf2Q3UAW9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brf2Q3UAW9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brf2Q3UAW9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brf2Q3UAW9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brf2Q3UAW9 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.66■□□□□ 0.42
Brf2Q3UAW9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brf2Q3UAW9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.64■□□□□ 0.42
Brf2Q3UAW9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Brf2Q3UAW9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.64■□□□□ 0.41
Brf2Q3UAW9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brf2Q3UAW9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brf2Q3UAW9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Brf2Q3UAW9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Brf2Q3UAW9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Brf2Q3UAW9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brf2Q3UAW9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brf2Q3UAW9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Brf2Q3UAW9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Brf2Q3UAW9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.64■□□□□ 0.41
Brf2Q3UAW9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Brf2Q3UAW9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Brf2Q3UAW9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Brf2Q3UAW9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Brf2Q3UAW9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.63■□□□□ 0.41
Brf2Q3UAW9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.63■□□□□ 0.41
Brf2Q3UAW9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Brf2Q3UAW9 Gm38205-201ENSMUST00000192243 258 ntBASIC17.63■□□□□ 0.41
Brf2Q3UAW9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Brf2Q3UAW9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Brf2Q3UAW9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Brf2Q3UAW9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Brf2Q3UAW9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Brf2Q3UAW9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Brf2Q3UAW9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Brf2Q3UAW9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Brf2Q3UAW9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brf2Q3UAW9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brf2Q3UAW9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Brf2Q3UAW9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Brf2Q3UAW9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Brf2Q3UAW9 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.62■□□□□ 0.41
Brf2Q3UAW9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.62■□□□□ 0.41
Brf2Q3UAW9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brf2Q3UAW9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brf2Q3UAW9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brf2Q3UAW9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brf2Q3UAW9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Brf2Q3UAW9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brf2Q3UAW9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Brf2Q3UAW9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brf2Q3UAW9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.61■□□□□ 0.41
Brf2Q3UAW9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Brf2Q3UAW9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Brf2Q3UAW9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Brf2Q3UAW9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Brf2Q3UAW9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Brf2Q3UAW9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Brf2Q3UAW9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Brf2Q3UAW9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.61■□□□□ 0.41
Brf2Q3UAW9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Brf2Q3UAW9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.61■□□□□ 0.41
Brf2Q3UAW9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Brf2Q3UAW9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Brf2Q3UAW9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms