Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Gm26833-201ENSMUST00000180899 440 ntBASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Gm6139-201ENSMUST00000079261 882 ntBASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf1aP25118 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1aP25118 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1aP25118 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1aP25118 Gm43017-201ENSMUST00000198296 752 ntBASIC15.67■□□□□ 0.1
Tnfrsf1aP25118 Gm40848-201ENSMUST00000221998 324 ntBASIC15.67■□□□□ 0.1
Tnfrsf1aP25118 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1aP25118 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Tnfrsf1aP25118 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1aP25118 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.67■□□□□ 0.1
Tnfrsf1aP25118 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1aP25118 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Tnfrsf1aP25118 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1aP25118 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.67■□□□□ 0.1
Tnfrsf1aP25118 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1aP25118 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms