Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dkk1O54908 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Dkk1O54908 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dkk1O54908 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dkk1O54908 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Dkk1O54908 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Dkk1O54908 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Dkk1O54908 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Dkk1O54908 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Dkk1O54908 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.27■□□□□ 0.2
Dkk1O54908 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Dkk1O54908 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Dkk1O54908 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Dkk1O54908 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Dkk1O54908 Gm13534-201ENSMUST00000121169 513 ntBASIC16.27■□□□□ 0.2
Dkk1O54908 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Dkk1O54908 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Dkk1O54908 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.27■□□□□ 0.2
Dkk1O54908 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.27■□□□□ 0.2
Dkk1O54908 Gm26571-201ENSMUST00000181399 666 ntBASIC16.27■□□□□ 0.2
Dkk1O54908 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC16.27■□□□□ 0.2
Dkk1O54908 Gm43037-201ENSMUST00000196808 250 ntBASIC16.27■□□□□ 0.2
Dkk1O54908 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
Dkk1O54908 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Dkk1O54908 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Dkk1O54908 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Dkk1O54908 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Dkk1O54908 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Dkk1O54908 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.26■□□□□ 0.19
Dkk1O54908 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Dkk1O54908 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Dkk1O54908 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Dkk1O54908 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.26■□□□□ 0.19
Dkk1O54908 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.26■□□□□ 0.19
Dkk1O54908 Gm42778-201ENSMUST00000199644 553 ntBASIC16.26■□□□□ 0.19
Dkk1O54908 Gm45071-201ENSMUST00000205353 571 ntBASIC16.26■□□□□ 0.19
Dkk1O54908 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Dkk1O54908 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Dkk1O54908 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.26■□□□□ 0.19
Dkk1O54908 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Dkk1O54908 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.26■□□□□ 0.19
Dkk1O54908 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Dkk1O54908 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Dkk1O54908 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Dkk1O54908 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.25■□□□□ 0.19
Dkk1O54908 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dkk1O54908 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dkk1O54908 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Dkk1O54908 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dkk1O54908 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Dkk1O54908 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dkk1O54908 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dkk1O54908 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.24■□□□□ 0.19
Dkk1O54908 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dkk1O54908 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dkk1O54908 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Dkk1O54908 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Dkk1O54908 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Dkk1O54908 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC16.24■□□□□ 0.19
Dkk1O54908 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Dkk1O54908 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Dkk1O54908 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Dkk1O54908 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Dkk1O54908 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dkk1O54908 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dkk1O54908 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dkk1O54908 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dkk1O54908 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dkk1O54908 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Dkk1O54908 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dkk1O54908 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dkk1O54908 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dkk1O54908 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.23■□□□□ 0.19
Dkk1O54908 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Dkk1O54908 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC16.23■□□□□ 0.19
Dkk1O54908 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dkk1O54908 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.23■□□□□ 0.19
Dkk1O54908 Gm18671-201ENSMUST00000214826 683 ntBASIC16.23■□□□□ 0.19
Dkk1O54908 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dkk1O54908 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Dkk1O54908 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dkk1O54908 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dkk1O54908 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Dkk1O54908 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dkk1O54908 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dkk1O54908 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dkk1O54908 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Dkk1O54908 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Dkk1O54908 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dkk1O54908 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dkk1O54908 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dkk1O54908 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Dkk1O54908 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dkk1O54908 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dkk1O54908 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dkk1O54908 Gm22885-201ENSMUST00000157410 107 ntBASIC16.22■□□□□ 0.19
Dkk1O54908 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.22■□□□□ 0.19
Dkk1O54908 AV356131-201ENSMUST00000206201 750 ntBASIC16.22■□□□□ 0.19
Dkk1O54908 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.22■□□□□ 0.19
Dkk1O54908 CT025642.1-201ENSMUST00000224734 1219 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms