Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hps1O08983 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.29■□□□□ 0.36
Hps1O08983 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hps1O08983 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hps1O08983 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hps1O08983 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hps1O08983 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.29■□□□□ 0.36
Hps1O08983 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hps1O08983 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hps1O08983 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hps1O08983 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hps1O08983 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hps1O08983 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.29■□□□□ 0.36
Hps1O08983 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hps1O08983 Gm42569-201ENSMUST00000200539 472 ntBASIC17.29■□□□□ 0.36
Hps1O08983 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hps1O08983 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hps1O08983 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hps1O08983 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hps1O08983 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hps1O08983 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hps1O08983 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hps1O08983 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Hps1O08983 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hps1O08983 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hps1O08983 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hps1O08983 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hps1O08983 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Hps1O08983 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Hps1O08983 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hps1O08983 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hps1O08983 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hps1O08983 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Hps1O08983 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Hps1O08983 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hps1O08983 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hps1O08983 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hps1O08983 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hps1O08983 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.28■□□□□ 0.36
Hps1O08983 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hps1O08983 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hps1O08983 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hps1O08983 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hps1O08983 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hps1O08983 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hps1O08983 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Hps1O08983 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hps1O08983 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.27■□□□□ 0.36
Hps1O08983 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hps1O08983 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hps1O08983 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hps1O08983 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.27■□□□□ 0.36
Hps1O08983 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hps1O08983 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Hps1O08983 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hps1O08983 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hps1O08983 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Hps1O08983 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hps1O08983 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hps1O08983 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hps1O08983 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.26■□□□□ 0.35
Hps1O08983 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hps1O08983 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.26■□□□□ 0.35
Hps1O08983 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hps1O08983 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.26■□□□□ 0.35
Hps1O08983 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hps1O08983 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.26■□□□□ 0.35
Hps1O08983 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hps1O08983 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hps1O08983 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hps1O08983 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hps1O08983 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hps1O08983 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hps1O08983 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hps1O08983 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hps1O08983 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hps1O08983 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Hps1O08983 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hps1O08983 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hps1O08983 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hps1O08983 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Hps1O08983 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hps1O08983 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hps1O08983 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hps1O08983 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hps1O08983 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hps1O08983 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hps1O08983 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hps1O08983 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hps1O08983 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Hps1O08983 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hps1O08983 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hps1O08983 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hps1O08983 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hps1O08983 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hps1O08983 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hps1O08983 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Hps1O08983 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.24■□□□□ 0.35
Hps1O08983 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hps1O08983 Gm27405-201ENSMUST00000184201 112 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms