Protein–RNA interactions for Protein: J3QQ59

Gm3383, Predicted gene 3194, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3383J3QQ59 Mir1199-201ENSMUST00000117015 119 ntBASIC20.3■□□□□ 0.84
Gm3383J3QQ59 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3383J3QQ59 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3383J3QQ59 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3383J3QQ59 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3383J3QQ59 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3383J3QQ59 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3383J3QQ59 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3383J3QQ59 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3383J3QQ59 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Gm3383J3QQ59 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3383J3QQ59 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.29■□□□□ 0.84
Gm3383J3QQ59 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.29■□□□□ 0.84
Gm3383J3QQ59 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.29■□□□□ 0.84
Gm3383J3QQ59 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.29■□□□□ 0.84
Gm3383J3QQ59 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.29■□□□□ 0.84
Gm3383J3QQ59 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Gm3383J3QQ59 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3383J3QQ59 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Gm3383J3QQ59 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
Gm3383J3QQ59 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3383J3QQ59 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3383J3QQ59 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3383J3QQ59 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3383J3QQ59 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3383J3QQ59 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3383J3QQ59 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Gm3383J3QQ59 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3383J3QQ59 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3383J3QQ59 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Gm3383J3QQ59 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3383J3QQ59 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3383J3QQ59 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3383J3QQ59 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3383J3QQ59 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3383J3QQ59 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gm3383J3QQ59 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3383J3QQ59 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Gm3383J3QQ59 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.28■□□□□ 0.84
Gm3383J3QQ59 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3383J3QQ59 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.27■□□□□ 0.84
Gm3383J3QQ59 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3383J3QQ59 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gm3383J3QQ59 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3383J3QQ59 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3383J3QQ59 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Gm3383J3QQ59 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3383J3QQ59 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.27■□□□□ 0.84
Gm3383J3QQ59 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.27■□□□□ 0.84
Gm3383J3QQ59 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3383J3QQ59 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3383J3QQ59 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3383J3QQ59 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3383J3QQ59 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3383J3QQ59 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm3383J3QQ59 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm3383J3QQ59 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Gm3383J3QQ59 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Gm3383J3QQ59 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3383J3QQ59 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3383J3QQ59 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3383J3QQ59 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Gm3383J3QQ59 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Gm3383J3QQ59 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.26■□□□□ 0.83
Gm3383J3QQ59 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.26■□□□□ 0.83
Gm3383J3QQ59 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.26■□□□□ 0.83
Gm3383J3QQ59 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Gm3383J3QQ59 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.26■□□□□ 0.83
Gm3383J3QQ59 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3383J3QQ59 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3383J3QQ59 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3383J3QQ59 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Gm3383J3QQ59 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3383J3QQ59 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3383J3QQ59 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3383J3QQ59 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3383J3QQ59 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3383J3QQ59 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3383J3QQ59 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.25■□□□□ 0.83
Gm3383J3QQ59 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Gm3383J3QQ59 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.25■□□□□ 0.83
Gm3383J3QQ59 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.25■□□□□ 0.83
Gm3383J3QQ59 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3383J3QQ59 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3383J3QQ59 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.25■□□□□ 0.83
Gm3383J3QQ59 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3383J3QQ59 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.24■□□□□ 0.83
Gm3383J3QQ59 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3383J3QQ59 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Gm3383J3QQ59 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3383J3QQ59 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3383J3QQ59 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3383J3QQ59 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Gm3383J3QQ59 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3383J3QQ59 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Gm3383J3QQ59 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3383J3QQ59 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3383J3QQ59 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3383J3QQ59 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3383J3QQ59 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms