Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Fst-202ENSMUST00000223640 2612 ntBASIC14.69□□□□□ -0.06
Trbv1A0A0B4J1G7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv1A0A0B4J1G7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv1A0A0B4J1G7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
Trbv1A0A0B4J1G7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv1A0A0B4J1G7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv1A0A0B4J1G7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv1A0A0B4J1G7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv1A0A0B4J1G7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv1A0A0B4J1G7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv1A0A0B4J1G7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Gm9847-201ENSMUST00000052528 599 ntBASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv1A0A0B4J1G7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv1A0A0B4J1G7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv1A0A0B4J1G7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv1A0A0B4J1G7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms