Protein–RNA interactions for Protein: A0A0A6YWX2

Ighv1-49, Immunoglobulin heavy variable 1-49 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-49A0A0A6YWX2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Golph3-205ENSMUST00000228671 2842 ntBASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.33□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ighv1-49A0A0A6YWX2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.31□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-49A0A0A6YWX2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ighv1-49A0A0A6YWX2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 278.9 ms