Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.99■□□□□ 0.79
Clp1Q99LI9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Clp1Q99LI9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Clp1Q99LI9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Clp1Q99LI9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.99■□□□□ 0.79
Clp1Q99LI9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Clp1Q99LI9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clp1Q99LI9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clp1Q99LI9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clp1Q99LI9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clp1Q99LI9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clp1Q99LI9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Clp1Q99LI9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.98■□□□□ 0.79
Clp1Q99LI9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.98■□□□□ 0.79
Clp1Q99LI9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clp1Q99LI9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clp1Q99LI9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clp1Q99LI9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clp1Q99LI9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clp1Q99LI9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Clp1Q99LI9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Clp1Q99LI9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Clp1Q99LI9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clp1Q99LI9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.98■□□□□ 0.79
Clp1Q99LI9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clp1Q99LI9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clp1Q99LI9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clp1Q99LI9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Clp1Q99LI9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Clp1Q99LI9 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.97■□□□□ 0.79
Clp1Q99LI9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.97■□□□□ 0.79
Clp1Q99LI9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clp1Q99LI9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clp1Q99LI9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clp1Q99LI9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clp1Q99LI9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clp1Q99LI9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.97■□□□□ 0.79
Clp1Q99LI9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clp1Q99LI9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clp1Q99LI9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clp1Q99LI9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clp1Q99LI9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clp1Q99LI9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clp1Q99LI9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clp1Q99LI9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Clp1Q99LI9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clp1Q99LI9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clp1Q99LI9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clp1Q99LI9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clp1Q99LI9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clp1Q99LI9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clp1Q99LI9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.95■□□□□ 0.78
Clp1Q99LI9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.95■□□□□ 0.78
Clp1Q99LI9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clp1Q99LI9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Clp1Q99LI9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clp1Q99LI9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Clp1Q99LI9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clp1Q99LI9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clp1Q99LI9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Clp1Q99LI9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clp1Q99LI9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Clp1Q99LI9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clp1Q99LI9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clp1Q99LI9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clp1Q99LI9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clp1Q99LI9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.94■□□□□ 0.78
Clp1Q99LI9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.94■□□□□ 0.78
Clp1Q99LI9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clp1Q99LI9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clp1Q99LI9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clp1Q99LI9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clp1Q99LI9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clp1Q99LI9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Clp1Q99LI9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clp1Q99LI9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clp1Q99LI9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.93■□□□□ 0.78
Clp1Q99LI9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clp1Q99LI9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Clp1Q99LI9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.93■□□□□ 0.78
Clp1Q99LI9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clp1Q99LI9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clp1Q99LI9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clp1Q99LI9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clp1Q99LI9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clp1Q99LI9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clp1Q99LI9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clp1Q99LI9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Clp1Q99LI9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clp1Q99LI9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Clp1Q99LI9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clp1Q99LI9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Clp1Q99LI9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clp1Q99LI9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clp1Q99LI9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clp1Q99LI9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clp1Q99LI9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Clp1Q99LI9 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.92■□□□□ 0.78
Clp1Q99LI9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Clp1Q99LI9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms