Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap2Q8VC34 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap2Q8VC34 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap2Q8VC34 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.69■□□□□ 0.9
Rpap2Q8VC34 Gm8495-201ENSMUST00000188740 694 ntBASIC20.69■□□□□ 0.9
Rpap2Q8VC34 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap2Q8VC34 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap2Q8VC34 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap2Q8VC34 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rpap2Q8VC34 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpap2Q8VC34 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Rpap2Q8VC34 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
Rpap2Q8VC34 Gm18671-201ENSMUST00000214826 683 ntBASIC20.68■□□□□ 0.9
Rpap2Q8VC34 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpap2Q8VC34 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Rpap2Q8VC34 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Rpap2Q8VC34 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Rpap2Q8VC34 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rpap2Q8VC34 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.68■□□□□ 0.9
Rpap2Q8VC34 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap2Q8VC34 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap2Q8VC34 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.67■□□□□ 0.9
Rpap2Q8VC34 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap2Q8VC34 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap2Q8VC34 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap2Q8VC34 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap2Q8VC34 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Rpap2Q8VC34 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap2Q8VC34 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rpap2Q8VC34 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap2Q8VC34 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rpap2Q8VC34 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap2Q8VC34 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rpap2Q8VC34 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap2Q8VC34 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap2Q8VC34 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap2Q8VC34 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.66■□□□□ 0.9
Rpap2Q8VC34 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap2Q8VC34 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap2Q8VC34 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.66■□□□□ 0.9
Rpap2Q8VC34 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap2Q8VC34 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap2Q8VC34 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap2Q8VC34 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap2Q8VC34 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap2Q8VC34 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap2Q8VC34 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.65■□□□□ 0.9
Rpap2Q8VC34 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap2Q8VC34 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.64■□□□□ 0.9
Rpap2Q8VC34 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
Rpap2Q8VC34 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rpap2Q8VC34 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Rpap2Q8VC34 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Rpap2Q8VC34 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rpap2Q8VC34 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Rpap2Q8VC34 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpap2Q8VC34 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.64■□□□□ 0.89
Rpap2Q8VC34 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.64■□□□□ 0.89
Rpap2Q8VC34 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpap2Q8VC34 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rpap2Q8VC34 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpap2Q8VC34 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpap2Q8VC34 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpap2Q8VC34 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpap2Q8VC34 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpap2Q8VC34 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpap2Q8VC34 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rpap2Q8VC34 AV356131-201ENSMUST00000206201 750 ntBASIC20.63■□□□□ 0.89
Rpap2Q8VC34 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rpap2Q8VC34 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpap2Q8VC34 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.63■□□□□ 0.89
Rpap2Q8VC34 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpap2Q8VC34 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpap2Q8VC34 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpap2Q8VC34 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpap2Q8VC34 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rpap2Q8VC34 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpap2Q8VC34 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rpap2Q8VC34 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpap2Q8VC34 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpap2Q8VC34 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpap2Q8VC34 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms