Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrif1Q8CDD9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrif1Q8CDD9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrif1Q8CDD9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrif1Q8CDD9 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.59■□□□□ 0.57
Lrif1Q8CDD9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrif1Q8CDD9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.58■□□□□ 0.57
Lrif1Q8CDD9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lrif1Q8CDD9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lrif1Q8CDD9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Lrif1Q8CDD9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lrif1Q8CDD9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lrif1Q8CDD9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lrif1Q8CDD9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lrif1Q8CDD9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lrif1Q8CDD9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
Lrif1Q8CDD9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lrif1Q8CDD9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lrif1Q8CDD9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lrif1Q8CDD9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrif1Q8CDD9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lrif1Q8CDD9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.57■□□□□ 0.56
Lrif1Q8CDD9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrif1Q8CDD9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrif1Q8CDD9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrif1Q8CDD9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrif1Q8CDD9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Lrif1Q8CDD9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrif1Q8CDD9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Lrif1Q8CDD9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrif1Q8CDD9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Lrif1Q8CDD9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrif1Q8CDD9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrif1Q8CDD9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.56■□□□□ 0.56
Lrif1Q8CDD9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lrif1Q8CDD9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrif1Q8CDD9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrif1Q8CDD9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lrif1Q8CDD9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Lrif1Q8CDD9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Lrif1Q8CDD9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.54■□□□□ 0.56
Lrif1Q8CDD9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrif1Q8CDD9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrif1Q8CDD9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Lrif1Q8CDD9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Lrif1Q8CDD9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lrif1Q8CDD9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrif1Q8CDD9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Lrif1Q8CDD9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrif1Q8CDD9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrif1Q8CDD9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrif1Q8CDD9 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.53■□□□□ 0.56
Lrif1Q8CDD9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lrif1Q8CDD9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrif1Q8CDD9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.53■□□□□ 0.56
Lrif1Q8CDD9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Lrif1Q8CDD9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrif1Q8CDD9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrif1Q8CDD9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrif1Q8CDD9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrif1Q8CDD9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrif1Q8CDD9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lrif1Q8CDD9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Lrif1Q8CDD9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrif1Q8CDD9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrif1Q8CDD9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Lrif1Q8CDD9 Gm43137-201ENSMUST00000198052 594 ntBASIC18.52■□□□□ 0.56
Lrif1Q8CDD9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrif1Q8CDD9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrif1Q8CDD9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lrif1Q8CDD9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Lrif1Q8CDD9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lrif1Q8CDD9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lrif1Q8CDD9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrif1Q8CDD9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lrif1Q8CDD9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.51■□□□□ 0.55
Lrif1Q8CDD9 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.51■□□□□ 0.55
Lrif1Q8CDD9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.51■□□□□ 0.55
Lrif1Q8CDD9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrif1Q8CDD9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lrif1Q8CDD9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms