Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Smchd1Q6P5D8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Smchd1Q6P5D8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smchd1Q6P5D8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smchd1Q6P5D8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smchd1Q6P5D8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Smchd1Q6P5D8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.8■□□□□ 0.92
Smchd1Q6P5D8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smchd1Q6P5D8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Smchd1Q6P5D8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smchd1Q6P5D8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smchd1Q6P5D8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.8■□□□□ 0.92
Smchd1Q6P5D8 Notumos-201ENSMUST00000151998 2659 ntBASIC20.8■□□□□ 0.92
Smchd1Q6P5D8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smchd1Q6P5D8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smchd1Q6P5D8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Smchd1Q6P5D8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smchd1Q6P5D8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smchd1Q6P5D8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Smchd1Q6P5D8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smchd1Q6P5D8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smchd1Q6P5D8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smchd1Q6P5D8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.78■□□□□ 0.92
Smchd1Q6P5D8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smchd1Q6P5D8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Smchd1Q6P5D8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smchd1Q6P5D8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smchd1Q6P5D8 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.78■□□□□ 0.92
Smchd1Q6P5D8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smchd1Q6P5D8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smchd1Q6P5D8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smchd1Q6P5D8 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.78■□□□□ 0.92
Smchd1Q6P5D8 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.78■□□□□ 0.92
Smchd1Q6P5D8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smchd1Q6P5D8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smchd1Q6P5D8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smchd1Q6P5D8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Smchd1Q6P5D8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smchd1Q6P5D8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smchd1Q6P5D8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.77■□□□□ 0.92
Smchd1Q6P5D8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
Smchd1Q6P5D8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smchd1Q6P5D8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.77■□□□□ 0.92
Smchd1Q6P5D8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smchd1Q6P5D8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smchd1Q6P5D8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smchd1Q6P5D8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smchd1Q6P5D8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.77■□□□□ 0.91
Smchd1Q6P5D8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smchd1Q6P5D8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smchd1Q6P5D8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smchd1Q6P5D8 Dio3-201ENSMUST00000097228 1449 ntBASIC20.77■□□□□ 0.91
Smchd1Q6P5D8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Smchd1Q6P5D8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.76■□□□□ 0.91
Smchd1Q6P5D8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smchd1Q6P5D8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Smchd1Q6P5D8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.76■□□□□ 0.91
Smchd1Q6P5D8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smchd1Q6P5D8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smchd1Q6P5D8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.75■□□□□ 0.91
Smchd1Q6P5D8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.75■□□□□ 0.91
Smchd1Q6P5D8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Smchd1Q6P5D8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smchd1Q6P5D8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smchd1Q6P5D8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smchd1Q6P5D8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smchd1Q6P5D8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.75■□□□□ 0.91
Smchd1Q6P5D8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smchd1Q6P5D8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smchd1Q6P5D8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smchd1Q6P5D8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smchd1Q6P5D8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smchd1Q6P5D8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smchd1Q6P5D8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smchd1Q6P5D8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smchd1Q6P5D8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Smchd1Q6P5D8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smchd1Q6P5D8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smchd1Q6P5D8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smchd1Q6P5D8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smchd1Q6P5D8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smchd1Q6P5D8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smchd1Q6P5D8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smchd1Q6P5D8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smchd1Q6P5D8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smchd1Q6P5D8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Smchd1Q6P5D8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smchd1Q6P5D8 Gm27275-201ENSMUST00000184318 272 ntBASIC20.73■□□□□ 0.91
Smchd1Q6P5D8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.73■□□□□ 0.91
Smchd1Q6P5D8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smchd1Q6P5D8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smchd1Q6P5D8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smchd1Q6P5D8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.73■□□□□ 0.91
Smchd1Q6P5D8 Trmt13-210ENSMUST00000198454 880 ntBASIC20.73■□□□□ 0.91
Smchd1Q6P5D8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smchd1Q6P5D8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.73■□□□□ 0.91
Smchd1Q6P5D8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Smchd1Q6P5D8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Smchd1Q6P5D8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smchd1Q6P5D8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms