Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VcanQ62059 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VcanQ62059 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
VcanQ62059 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
VcanQ62059 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VcanQ62059 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VcanQ62059 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VcanQ62059 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VcanQ62059 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VcanQ62059 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VcanQ62059 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VcanQ62059 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VcanQ62059 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VcanQ62059 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VcanQ62059 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VcanQ62059 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.88■□□□□ 0.45
VcanQ62059 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.88■□□□□ 0.45
VcanQ62059 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.88■□□□□ 0.45
VcanQ62059 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
VcanQ62059 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VcanQ62059 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.87■□□□□ 0.45
VcanQ62059 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VcanQ62059 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VcanQ62059 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VcanQ62059 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.87■□□□□ 0.45
VcanQ62059 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VcanQ62059 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VcanQ62059 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VcanQ62059 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VcanQ62059 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.87■□□□□ 0.45
VcanQ62059 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VcanQ62059 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VcanQ62059 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.86■□□□□ 0.45
VcanQ62059 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VcanQ62059 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VcanQ62059 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.86■□□□□ 0.45
VcanQ62059 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.86■□□□□ 0.45
VcanQ62059 Gm30025-201ENSMUST00000218555 728 ntBASIC17.86■□□□□ 0.45
VcanQ62059 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VcanQ62059 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VcanQ62059 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VcanQ62059 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VcanQ62059 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VcanQ62059 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VcanQ62059 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
VcanQ62059 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VcanQ62059 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VcanQ62059 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VcanQ62059 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
VcanQ62059 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VcanQ62059 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VcanQ62059 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
VcanQ62059 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VcanQ62059 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
VcanQ62059 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VcanQ62059 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VcanQ62059 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VcanQ62059 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VcanQ62059 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VcanQ62059 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VcanQ62059 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VcanQ62059 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.84■□□□□ 0.45
VcanQ62059 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.84■□□□□ 0.45
VcanQ62059 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VcanQ62059 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VcanQ62059 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.84■□□□□ 0.45
VcanQ62059 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VcanQ62059 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VcanQ62059 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VcanQ62059 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.84■□□□□ 0.45
VcanQ62059 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VcanQ62059 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VcanQ62059 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VcanQ62059 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.83■□□□□ 0.45
VcanQ62059 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VcanQ62059 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VcanQ62059 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VcanQ62059 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VcanQ62059 Gm44549-201ENSMUST00000208351 577 ntBASIC17.83■□□□□ 0.44
VcanQ62059 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VcanQ62059 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VcanQ62059 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VcanQ62059 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VcanQ62059 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VcanQ62059 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.82■□□□□ 0.44
VcanQ62059 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VcanQ62059 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VcanQ62059 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VcanQ62059 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VcanQ62059 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VcanQ62059 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VcanQ62059 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VcanQ62059 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VcanQ62059 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
VcanQ62059 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VcanQ62059 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.81■□□□□ 0.44
VcanQ62059 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VcanQ62059 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VcanQ62059 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VcanQ62059 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 174 ms