Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Shroom1Q5SX79 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.01■□□□□ 0.79
Shroom1Q5SX79 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Shroom1Q5SX79 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.01■□□□□ 0.79
Shroom1Q5SX79 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Shroom1Q5SX79 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Shroom1Q5SX79 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shroom1Q5SX79 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Shroom1Q5SX79 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shroom1Q5SX79 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Shroom1Q5SX79 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Shroom1Q5SX79 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shroom1Q5SX79 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20■□□□□ 0.79
Shroom1Q5SX79 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shroom1Q5SX79 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shroom1Q5SX79 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shroom1Q5SX79 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shroom1Q5SX79 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Shroom1Q5SX79 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shroom1Q5SX79 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shroom1Q5SX79 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shroom1Q5SX79 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Shroom1Q5SX79 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Shroom1Q5SX79 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shroom1Q5SX79 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Shroom1Q5SX79 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.99■□□□□ 0.79
Shroom1Q5SX79 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
Shroom1Q5SX79 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Shroom1Q5SX79 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shroom1Q5SX79 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Shroom1Q5SX79 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Shroom1Q5SX79 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Shroom1Q5SX79 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Shroom1Q5SX79 Gm20049-201ENSMUST00000219950 730 ntBASIC19.98■□□□□ 0.79
Shroom1Q5SX79 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shroom1Q5SX79 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shroom1Q5SX79 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shroom1Q5SX79 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shroom1Q5SX79 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Shroom1Q5SX79 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shroom1Q5SX79 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.98■□□□□ 0.79
Shroom1Q5SX79 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Gm8520-201ENSMUST00000186517 868 ntBASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Gm26524-201ENSMUST00000192339 390 ntBASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Shroom1Q5SX79 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.97■□□□□ 0.79
Shroom1Q5SX79 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom1Q5SX79 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shroom1Q5SX79 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shroom1Q5SX79 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.95■□□□□ 0.78
Shroom1Q5SX79 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Shroom1Q5SX79 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shroom1Q5SX79 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Shroom1Q5SX79 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shroom1Q5SX79 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Shroom1Q5SX79 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Shroom1Q5SX79 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shroom1Q5SX79 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shroom1Q5SX79 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shroom1Q5SX79 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shroom1Q5SX79 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Shroom1Q5SX79 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Shroom1Q5SX79 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms