Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.63■□□□□ 0.41
Sox2P48432 Gm5812-201ENSMUST00000061073 957 ntBASIC17.63■□□□□ 0.41
Sox2P48432 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sox2P48432 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox2P48432 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox2P48432 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox2P48432 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox2P48432 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox2P48432 Gm15546-201ENSMUST00000122095 826 ntBASIC17.62■□□□□ 0.41
Sox2P48432 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
Sox2P48432 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sox2P48432 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
Sox2P48432 Gm9959-201ENSMUST00000068277 390 ntBASIC17.62■□□□□ 0.41
Sox2P48432 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sox2P48432 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox2P48432 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox2P48432 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox2P48432 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox2P48432 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox2P48432 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox2P48432 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox2P48432 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox2P48432 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Sox2P48432 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox2P48432 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox2P48432 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.61■□□□□ 0.41
Sox2P48432 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox2P48432 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox2P48432 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox2P48432 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.61■□□□□ 0.41
Sox2P48432 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox2P48432 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox2P48432 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox2P48432 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sox2P48432 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox2P48432 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox2P48432 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Sox2P48432 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox2P48432 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox2P48432 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox2P48432 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.61■□□□□ 0.41
Sox2P48432 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox2P48432 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox2P48432 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox2P48432 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox2P48432 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox2P48432 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox2P48432 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox2P48432 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox2P48432 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox2P48432 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox2P48432 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.6■□□□□ 0.41
Sox2P48432 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.6■□□□□ 0.41
Sox2P48432 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.6■□□□□ 0.41
Sox2P48432 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.6■□□□□ 0.41
Sox2P48432 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sox2P48432 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.6■□□□□ 0.41
Sox2P48432 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Sox2P48432 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox2P48432 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox2P48432 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sox2P48432 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox2P48432 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox2P48432 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox2P48432 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.59■□□□□ 0.41
Sox2P48432 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.59■□□□□ 0.41
Sox2P48432 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
Sox2P48432 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Sox2P48432 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sox2P48432 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox2P48432 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox2P48432 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox2P48432 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox2P48432 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox2P48432 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox2P48432 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox2P48432 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Sox2P48432 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox2P48432 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.58■□□□□ 0.4
Sox2P48432 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sox2P48432 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox2P48432 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Sox2P48432 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sox2P48432 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sox2P48432 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox2P48432 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox2P48432 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox2P48432 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sox2P48432 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox2P48432 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox2P48432 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.58■□□□□ 0.4
Sox2P48432 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.58■□□□□ 0.4
Sox2P48432 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox2P48432 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox2P48432 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.57■□□□□ 0.4
Sox2P48432 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox2P48432 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox2P48432 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox2P48432 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Sox2P48432 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms