Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav17A0A075B655 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav17A0A075B655 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trav17A0A075B655 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav17A0A075B655 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.95□□□□□ -0.02
Trav17A0A075B655 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav17A0A075B655 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.95□□□□□ -0.02
Trav17A0A075B655 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav17A0A075B655 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Trav17A0A075B655 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.94□□□□□ -0.02
Trav17A0A075B655 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Rarb-207ENSMUST00000225921 2756 ntBASIC14.94□□□□□ -0.02
Trav17A0A075B655 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.94□□□□□ -0.02
Trav17A0A075B655 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Serp2-204ENSMUST00000228055 705 ntBASIC14.94□□□□□ -0.02
Trav17A0A075B655 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.94□□□□□ -0.02
Trav17A0A075B655 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav17A0A075B655 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Gm22238-201ENSMUST00000175222 88 ntBASIC14.93□□□□□ -0.02
Trav17A0A075B655 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav17A0A075B655 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav17A0A075B655 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav17A0A075B655 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav17A0A075B655 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav17A0A075B655 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms